| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1392 |
|---|
| Symbol | |
|---|
| ID | 4005300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3378479 |
|---|
| End bp | 3379426 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637948241 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_559614 |
|---|
| Protein GI | 91784408 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.318212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACAGACT GTCAAGGTTA TTTTGACAAA GGCGCCGCCG TGGACGTCAA TTCCCTGACC
TTGCTGGTGG AGATTCTGGA CGCGGGCAAT CTCAGCGAAG CCGCGCGCCG GCTGAAAATG
AGCCGCGCGA ACGTGAGCTA TCACCTGAAC CAGCTGGAGC GCTCTATCGG CCTGCAACTG
GTTAGGCGCA CCACGCGCCG GGTCGAGCCG ACCGAGATCG GCCTGCAGCT GTACGAGCAC
GGCCGCGCGA TCCAGAATGC GCTGCTCGCC GCGCGCGAAT CCGTCACCAC GCTCGGGCAA
AGCCTGCAGG GCCGCGTGCG GCTGAGCGTG CCGAGCGGTT ATGGGCAGCT TGTCATGTCG
GACTGGCTGA TCGCGTTCAA GCGGCTTTAT CCCGGCATCG TGCTGGACGT GATGTTCGAG
AACCGCGTTG AAGACCTGAT GCGCGACGAA GTCGATATCG CCGTGCGCGT GATGTCCGAA
CCGCCGCAAA ACCTGGTGGC GCGCGACATG GGGCCGGTCA GGTACGTGGC GTGTGCGTCG
CCGGCTTTCG CGCAAACGCA CGGCATGCCG CGGCAACTCG ACGATCTGCG CACGGCGCCG
CTGATTACCT CGGCCGTGGT CGGCAGGCAG TTGCGCGTGG CCGCTTACTT GCGCGACGAG
CGGCACGAAG TGCTGCTGGA GCCGACGCTC ATCTCCGAGA ACTTTCTTTT TTTACGCCAG
GCGGTGCTCG CCGGGCTGGG CGTGGGCCTC GTGCCGGACT ACGTGGTGCA GGACGACCTG
CGCCGTGGCG ATGCGGTGAC CGCGCTCGAC GAATGGCGCT TGAGCATCTT CGGCACGCAT
ATGTACATGC TGTATATGCC GAACCGGCAT CACACGCGCG CGGCGGCGAC CTTCATCGAT
TTCATTTTGC AGCAGGCGCA TGGCACGGGC AGAGGCGTGC CGGCGTGA
|
|---|
| Protein sequence | MTDCQGYFDK GAAVDVNSLT LLVEILDAGN LSEAARRLKM SRANVSYHLN QLERSIGLQL
VRRTTRRVEP TEIGLQLYEH GRAIQNALLA ARESVTTLGQ SLQGRVRLSV PSGYGQLVMS
DWLIAFKRLY PGIVLDVMFE NRVEDLMRDE VDIAVRVMSE PPQNLVARDM GPVRYVACAS
PAFAQTHGMP RQLDDLRTAP LITSAVVGRQ LRVAAYLRDE RHEVLLEPTL ISENFLFLRQ
AVLAGLGVGL VPDYVVQDDL RRGDAVTALD EWRLSIFGTH MYMLYMPNRH HTRAAATFID
FILQQAHGTG RGVPA
|
|---|
| |