Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1385 |
Symbol | |
ID | 4003634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 3385990 |
End bp | 3388245 |
Gene Length | 2256 bp |
Protein Length | 751 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637948247 |
Product | putative extracellular nuclease |
Protein accession | YP_559620 |
Protein GI | 91784414 |
COG category | [S] Function unknown |
COG ID | [COG3204] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.14292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.827149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAAATAA AACTCTTAAT TTCTGCGATT CTCGCAGCCG GTCTTACTGC ATGTGGCGGG GGCGATATTG GCAGCAGCAC TGCCAATAAC AGTGGCAGCA ATACCACTGT GCCTGCAGTA GATAGCAAAA TTCCTGCGCT TGCATTTGCC GATCCGCAAA GCACCTATGA CCTGAATAGC TACACGCAGA CGGCCATGTT CCCGCTGCAG TTCGCTACGA GCGGCACCAA TCTGCTGAAC GCAGAGGCGT CCGGCGTGAC CTATGACAAG GATACCGATT CGCTGTTTGT CGTTGGAGAC GGCGCGACCT CAGTCGTGCA GGTTGCAAAG AGCGATGGTC ACGTTATCGA TTCCATGACG CTCAATGCCG GCGACTTCGA GGACACGGAA GGCATCACCT ATGTCGGCGG CGGCAAGTTC GTGCTGGTGG AAGAGAGGCT TCGTCAAGTC GATCTGTTCA CTTACGTTCC AGGCGGAACA CTGCGCAGAG CAGACGTACA GTCCGTCAAA TTAGGCACAA CGGTTGCCAA CGTCGGTATT GAGGGCATTA CTTTCGATAC GAAAACGGGT GGCTACATTG CCGTGCGCCA GTCGCAGCCC ACCAGCATCT TTCAGGCCGC AATCAATTTT GCGGCCGGCT CGGCGACAGC ATCGAACGGC ACGCCGATCC TGCCGACGAC AGACAATCCG CCGGTGCTGT TCGATGCGGC CACGACAGGT CTTTCCGCTT TCAATGACGT TTTCTCGTTG TCGAATATCG TACCGGGCAA CGCGCCGGAT TACGGCAACG TGATCATCAT CGGCGCGCCG GACGGCAAGA TCGTCAAGAT GGATCGTACC GGCAAACTGC TGGGCAGTTT GTATATGAGC GCCACCGCCC AGAACGAGGG CGTGACGATG GGTCCGGACG GCACCATTTA TGTGGTCGGT GAACAGGCTG CGGGACCGAG CCTGCCAGGC CTGACCCTCT TCAAGCCGAC CACCAGCGCG AGCAATGTCG GCATGGGCAG CAACCTCTAC CTGACGTTCG ATCAACCGGT GAAGGCGGGC GCGGGTAATA TCGTTCTCAG CAACGGCGCC GACGACACGC GGTCAATTCC TGTGACCGAT GCATCGCAAG TGACGTTCAG CGGCAATGTG ATGAAGATTC ATCCGAAGTT CTACATGGTT GCCGGCACCA CTTACCACAT CACGTATCCG GTGGGGGCGA TCAAGACGAC AGCGGGGAAT GATATTTCTG CCGTGTCCGA CTTATCGACA TTCTCGTTCA AGGCGGTCGG CACCGTCGAC CACACCGCCC CGACATTGAC CAGCACCGCG CCGGTGGATG GCGCGACAGG TATCGTCGGC AACCACATGA CGCTGTCGTT CAGCGAAGTC GTGCAGGCGG GCACGGGCAA CATCGTTATC AGTAACGGCT CCGATACGCG CAATGTTTCC GTAGACGACA CGACCCAGGT CAAATTCAAC GGCGCTCGGG TGAGCGTCAC GTTGGCGACA CCGTTGCAGG ATAGTTCTCG CTACACCGTG AAATTGGCCA GTGGCGTTAT CACCGACCTG TATGGCAACG CATATGCGGG CACGACACAG AGCTTCACGA CTGCGGCAGC AGGTGCGCCG GCGCCGACCG TGCTGATCTC CGAGGTGAAC TCGAACGCAG ACGGGGGCCA GGATTTCTTT GAAATCTACA ACTACGGCGG CACGGCAATT GATCTGACCG GCTGGAAGTG GGGCGACAAT CATGCTGACG TCAACGATGC CAACAATAGC GCGGCATTCG TGGCCGGTAC GATGCTTGCG CCGGGTGAAC ATCTGGTGGT TGTCCCGGGC GTGCCCGGAA CGGACGAAAA TACGTTCCGC ACAACGTGGG GTCTTGCCGG CACGGTTCCG GTCGTCGCGA TGTTGAACGT CAATAACGAT GCCGCGAATC CGATCGGTCT GGGTAAAGGC GATGCGGTGA TCGTCTACGA TGCGAACGGT AATGTTGCGG CCGCAATGAA CTATGGAACA CCGATCGCCG CAGCGCAGGG AGACGGCACG ACGAAAGCGA TTCCAACGGC ATTGGGTGCG GATGCGAGTC TGGTTGCCGC CGGAAATCAT GCTGGTGCTG TGTTCGTTGG CGGCAGTGCG AAGGTTTCCG CGGTGTGGGA TACGGTTTCG ACAACAACGC CAAACTATGT CGAGGCAGTG GTTGGCGTGC ACGGCGGTAT AGCCGAACCG CTCAAACCCG CTTCGATTGG CTCGCCTGGG CAGTAA
|
Protein sequence | MKIKLLISAI LAAGLTACGG GDIGSSTANN SGSNTTVPAV DSKIPALAFA DPQSTYDLNS YTQTAMFPLQ FATSGTNLLN AEASGVTYDK DTDSLFVVGD GATSVVQVAK SDGHVIDSMT LNAGDFEDTE GITYVGGGKF VLVEERLRQV DLFTYVPGGT LRRADVQSVK LGTTVANVGI EGITFDTKTG GYIAVRQSQP TSIFQAAINF AAGSATASNG TPILPTTDNP PVLFDAATTG LSAFNDVFSL SNIVPGNAPD YGNVIIIGAP DGKIVKMDRT GKLLGSLYMS ATAQNEGVTM GPDGTIYVVG EQAAGPSLPG LTLFKPTTSA SNVGMGSNLY LTFDQPVKAG AGNIVLSNGA DDTRSIPVTD ASQVTFSGNV MKIHPKFYMV AGTTYHITYP VGAIKTTAGN DISAVSDLST FSFKAVGTVD HTAPTLTSTA PVDGATGIVG NHMTLSFSEV VQAGTGNIVI SNGSDTRNVS VDDTTQVKFN GARVSVTLAT PLQDSSRYTV KLASGVITDL YGNAYAGTTQ SFTTAAAGAP APTVLISEVN SNADGGQDFF EIYNYGGTAI DLTGWKWGDN HADVNDANNS AAFVAGTMLA PGEHLVVVPG VPGTDENTFR TTWGLAGTVP VVAMLNVNND AANPIGLGKG DAVIVYDANG NVAAAMNYGT PIAAAQGDGT TKAIPTALGA DASLVAAGNH AGAVFVGGSA KVSAVWDTVS TTTPNYVEAV VGVHGGIAEP LKPASIGSPG Q
|
| |