| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1377 |
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| Symbol | ihfA |
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| ID | 4003643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3395153 |
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| End bp | 3395563 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637948256 |
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| Product | integration host factor subunit alpha |
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| Protein accession | YP_559628 |
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| Protein GI | 91784422 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.377563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.528891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGAAA TGAACTCGAG TGATTTCGAA GCCCTTCTTA CGGCGCAACG CAGCGCCATG
ATTCGCGATA TTCCGACATC ACCCGCCGTC GTTTCCGCTG AAACGCCGAC ACTCACCAAG
GCGGAACTTG CCGAGTTGCT GTTCGACAAT GTCGGGCTCA ACAAGCGGGA AGCGAAAGAC
ATGGTCGAAG CGTTTTTCGA GGTGATCCGC GACGCGCTGG AGAGTGGCGA CAGCGTGAAG
CTGTCGGGGT TCGGCAACTT CCAGTTGCGC GACAAGCCCC AGCGTCCCGG CAGAAACCCG
AAGACCGGCG AGGCGATTCC GATCGCCGCC CGCCGCGTTG TGACGTTTCA TGCAAGTCAA
AAGCTGAAGG CGCTGGTCGA GAACGGCGCT GAAGCGAGCT TCACGCGCTG A
|
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| Protein sequence | MNEMNSSDFE ALLTAQRSAM IRDIPTSPAV VSAETPTLTK AELAELLFDN VGLNKREAKD
MVEAFFEVIR DALESGDSVK LSGFGNFQLR DKPQRPGRNP KTGEAIPIAA RRVVTFHASQ
KLKALVENGA EASFTR
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