Gene Bxe_A1354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A1354 
Symbol 
ID4004107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp3421244 
End bp3422554 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content62% 
IMG OID637948280 
Productribonuclease BN 
Protein accessionYP_559651 
Protein GI91784445 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.875268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.303489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCAGGG TGCGTTTCGA TCTCGACACG CTCAAAAGGC TCGCGCAGTT TGCCGCGCAG 
CGCAGCAGCG AAGACCGTAT TCCGCAGGTG GCCGGCAGCC TCACGTTCAC CACCATGCTT
TCGCTCGTGC CGCTCGCCAC GGTGGCGTTC GCGCTGTTCA CCGCGTTTCC GATCTTTGCA
TCGTTCCAGA TGTCGCTGCA GATTTTTCTT GCCGACCATC TGATGCCCGC GCAACTCAAC
AGTCAGATCT TCAATTATCT GAACCAGTTT GCTTCGAAGG CGAAGGGCCT GACGACCATC
GGTATGATTT TTTTGTTCGT CACCGCCGTG ATGACGATGA TGACGGTCGA ATCCGCCTTC
AACGTGATCT GGCGCGTGCG CAAGGCGCGG CCGATCGCGC AGCGCATTCT GGTGTATTGG
GCGATCATCA CGCTCGGCCC GATTCTGATC GGCGTGAGCC TGTCGATTTC ATCGTACCTG
TTCACGCAAT CCATGACGTT CACGGCGGCG CAGCGCATGA CGCCGGTGAT CGAGTGGGCG
CTCGCCGGCG CCGCGCTGCC GCTCACCGCG GCCGCCTTCA CGATTCTCTA CGTCTATCTG
CCGAATTGCC GCGTGGAATG GCGCGACGCG GTGATCGGCG GTGTGACCGC CGCGATCGCT
TTCGAGCTCG CGAAGCGCGG CTTCGGCTAT TACGTGCGGC GCATTCCAAC CTACACCGCG
GTGTACGGCG CATTCGCGGC CGTGCCGCTG TTTCTGCTAT GGATGTACCT GTGCTGGTTC
ATCACGCTCG CGGGCGCGAT GATCGCGTCG GCGTTGCCGG CCATTCGCAT CGGCCAGTTT
CACCGGCCCA CCTTCGAGGG CAGTAATCTG TTCGACTCGC TCGAACTGCT CGCGCGGCTC
TCGGAAGCGC GCGACGCGGG CAAGCGCGGC TACACCGTGC CGGAACTCTC GCGCATGCTT
CGCCGCGATA TGGGCACCAC GATCAACCTG CTGGAAAAGC TCGAGGAGAT CGAGTGGATC
GCGCGCTTGC AGGAGGACGG GGCACGTCCG CATTTCCTGC TGCTGGCAAA CCCGGCGCAG
ATTACGGTCG AACGTCTGTT CGGCCTGTTC GTGATCGACC GCGCGGAACT CGGGTATCAA
CTCGAACTGG CGTCCACTCG CGTGGATGGT GAAATGCTGC TGGCCGCGCT GGAGAACGAC
AAACTGAAGG TGACGCTCGC CGCGTTGCTG ACAGCGCGCG CAGCCGCCCG TGCCGCACAG
GCCGCGGAGA ACGAATCGGG CACGTCTTCC ATGCCGCATC AGGCAGCTTG A
 
Protein sequence
MSRVRFDLDT LKRLAQFAAQ RSSEDRIPQV AGSLTFTTML SLVPLATVAF ALFTAFPIFA 
SFQMSLQIFL ADHLMPAQLN SQIFNYLNQF ASKAKGLTTI GMIFLFVTAV MTMMTVESAF
NVIWRVRKAR PIAQRILVYW AIITLGPILI GVSLSISSYL FTQSMTFTAA QRMTPVIEWA
LAGAALPLTA AAFTILYVYL PNCRVEWRDA VIGGVTAAIA FELAKRGFGY YVRRIPTYTA
VYGAFAAVPL FLLWMYLCWF ITLAGAMIAS ALPAIRIGQF HRPTFEGSNL FDSLELLARL
SEARDAGKRG YTVPELSRML RRDMGTTINL LEKLEEIEWI ARLQEDGARP HFLLLANPAQ
ITVERLFGLF VIDRAELGYQ LELASTRVDG EMLLAALEND KLKVTLAALL TARAAARAAQ
AAENESGTSS MPHQAA