Gene Bxe_A1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A1343 
Symbol 
ID4004118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp3432530 
End bp3433405 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content59% 
IMG OID637948291 
Productaromatic acid efflux system EmrA subfamily membrane fusion protein 
Protein accessionYP_559662 
Protein GI91784456 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0427147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.910085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCC GAAATATTGT GGGCTTCGTC GCGACAGCCG TTATTTTTAT CGTCGCGATT 
TTGATTGGAC GTGTGCTGTG GGTCCATTAC ATGGACGAAC CGTGGACGCG CGACGGTCGC
GTGCGCGCCG AGATCATAAA TATCGCACCG GATGTCTCGG GAGCGATCGT CGATCTGCCC
GTGAAGGACA ATCAGCTGGT GAAGAAAGGC GATCTGCTGA TGCAGATCGA CCCGTCGCAC
TATCAGCTTG CGGTCGAGCA GGCCCAGGCC GCGGTCGCCG CGCGAAAGGC CGAACTACAG
ATGAGGCGCG ATGACGCGCA ACGGCGTGCG GATATGGATG CGCTGGTGGT GTCGAAAGAG
AACCGTGAGA ATGCGACTCA CACGGCTTCG GCCGCCGAGG CTTCCTATCA GCAGGCGTTG
GCTGCGCTCG ATGCAGCCAG GCTGAATCTC GAACGCACGC GGGTGGTGTC GCCGGTCGAC
GGGTATGTCA CGAACCTGAG CGTGTTCCGC GGCGACTATG CGACGGTTGG TTCGGCCAAG
CTGGCGATTG TCGATAGCCA CTCGTTCTGG GTGTATGGGT ATTTCGAAGA AACCAAGCTG
CCGCACGTGC ATGTCGGCGA TAAGGCAGCA GTCCGGTTGA TGAGCGGCGG CACACTGCAA
GGGCATGTCG AGAGTATTTC CCGAGGGATT TATGATCGGG ATAATCCTGA AAGCCGTGAA
CTGCTTGCCG ACGTGAATCC GACTTTTAAC TGGGTGCGGT TGGCGCAGCG CGTGCCTGTG
CGGGTGAAGA TCGATTCGGT ACCCGACAAT GTCGTGCTGG CGGCGGGGAT TACTTGTACG
GTTGTGATTA CGCCTGCGAG TGCCAAGGCT GGGTGA
 
Protein sequence
MTIRNIVGFV ATAVIFIVAI LIGRVLWVHY MDEPWTRDGR VRAEIINIAP DVSGAIVDLP 
VKDNQLVKKG DLLMQIDPSH YQLAVEQAQA AVAARKAELQ MRRDDAQRRA DMDALVVSKE
NRENATHTAS AAEASYQQAL AALDAARLNL ERTRVVSPVD GYVTNLSVFR GDYATVGSAK
LAIVDSHSFW VYGYFEETKL PHVHVGDKAA VRLMSGGTLQ GHVESISRGI YDRDNPESRE
LLADVNPTFN WVRLAQRVPV RVKIDSVPDN VVLAAGITCT VVITPASAKA G