| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1326 |
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| Symbol | |
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| ID | 4005486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 3458430 |
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| End bp | 3460472 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637948308 |
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| Product | putative myo-inositol catabolism LolC protein |
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| Protein accession | YP_559679 |
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| Protein GI | 91784473 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0524] Sugar kinases, ribokinase family
[COG3892] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCATT CCAGCACATC CAGCGCAATC ATGTCCGCCC CGGCCCCGGC GGCCAGCCGC
TTCGCGCCGG GCCGCAGCCG CGACATCGTC TGCCTCGGCC GGCTCGCCGT GGATCTGTAC
GCGCAGCAGG TCGGCGCGCG GCTCGAAGAC GTGTCGAGCT TCGCGAAGTA TCTCGGCGGA
TCGTCGGCGA ATATCGCGTT CGGCTGCGCG CGGCTCGGTC TCGCGTCGTC GATGCTGGCG
CGCGTCGGCA ACGATCACAT GGGCCGCTTT CTCACCGAGA CGCTCACCAA AGAGGGCTGC
GACGTCAGCC ACGTGCGCAT CGACCGGGAA CGCCTGACCG CCCTCGTGCT GCTCGGCCTG
AAAGACCGCG ACACGTTCCC GCTGATCTTC TACCGCGAGA ACTGCGCGGA CATGGCAGTC
GATGAAGCGG ATTTCGACGA GGCCTTCATT GCATCGTCGA AAGCGCTGCT GATTACCGGC
ACGCACTTTT CCACCGAGCA GGTGAACCGC ACGAGCCGCC GCGCGCTCGA TTACGCACGC
CGCAACCAGG TGCGCACCGT GCTCGATATC GACTATCGCC CGGTGCTTTG GGGTCTTACC
GGCAAAGCGG ACGGTGAAAC GCGCTTCGTG GCGAGCGAAG GCGTCACCGC GCACTTGCAG
CGCATTCTGC CGCTGTTCGA TCTGGTGATC GGCACCGAGG AGGAATTCCG CATTGCCGGC
GGCAAGACCG AACTGGTCGA TGCGCTCGCG ATGGTGCGCG CCGTCACGCC GGCCACGCTC
GTGCTCAAGC GCGGGCCGCT GGGCTGCCAG ATCATCGACG GCCAGGTGCC CGCCTCGCTC
GACAATGTGC CGATTCACGG CGGCGTGGAA GTGGAAGTGC TGAACGTGCT CGGTGCGGGC
GACGCATTTG CTTCCGGCTT TCTCTCCGGA TGGTTGCGCG ATCAACCGCT CGAAGCCTGC
GCGCGCGCGG CGAACGCGAG CGGCGCGCTG GTCGTCTCGC GGCACGGCTG CGCGCCCGCC
ATGCCGACGC CCGCCGAACT CGACTACTTC CTGCGCGAAG CGAAAGCCGA TCCGCAGCGC
ATGCGCCGCC CGGATCGGGA CGCGGCACTC GCGCGGCTGC ATCGCGTCTC GCCGGCCCGC
AAACAGTGGG ACGAAGTGCT CGGTTTCGCC TTCGACCACC GCAACCAGTT CTTCGAACTC
GCGCAGCAGA CCGGCGCCGA CGAAGCGCGC ATAGCGCGCC TGAAAGGCCT GTTCGTCGAA
GCCGTCGCGC AAACCGAGAG CGCGTTGGGT CTGCAAAACC GCATCGGCGT GCTGATCGAC
GACCGTTACG GCCAGGACGC GCTGAACGCG GCCACTGGCC GTGGCTGGTG GATCGGCCGG
CCGGTGGAGT TGCCGGGTTC GGTGCCGCTC GTGTTCGATC ATGGCCGTTC GATCGGCACC
ACGCTGATCC CGTGGCCGCA GGAGCATATC GCCAAGTGTC TCGTGCAGTT TCATCCCGAC
GAACCCATCG AACAGCGCCT CGAACAGGAA GCGCAGTTGC GCGCGCTCTA CGACGCGACG
CAAGCGAGCG GCCACGAGCT GCTGCTCGAA GTGATTCCGC CGAAACATGC GCATTTGCCG
CAAGCACCGG ACGTTGTGTA CCGCGCGTTG AAGCGCCTGT ACAACATCGG CATCTACCCC
GAATGGTGGA AGCTCGAACC AATGGACGCC GCGCAATGGC GCAGCGTCGA CGCGCTGATC
GCGGAGCGCG ACCCCTATTG CCGGGGCGTG GTCCTGCTCG GTTTGTCGGC GGGCGTCGAA
CAGTTGAACG AAGGTTTCCG CGCGGCCGCG CAATCGGCGA CATGCCGCGG CTTCACGGTC
GGGCGCACCA TCTTCCATGA GCCAAGTCAT GCATGGCTCG CCGGAGAAAT CGGCGACGAC
GAACTGATCG CGCGCGTGCG CCGCACCTTC GAAACATTGA TCGCTTCGTG GCGTGCAACG
CGTGGCGCGG GCGCCGCGCA ACCCGGCACG CCGAACCCTG TCCATCAGGA GCAAGCCGCA
TGA
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| Protein sequence | MDHSSTSSAI MSAPAPAASR FAPGRSRDIV CLGRLAVDLY AQQVGARLED VSSFAKYLGG
SSANIAFGCA RLGLASSMLA RVGNDHMGRF LTETLTKEGC DVSHVRIDRE RLTALVLLGL
KDRDTFPLIF YRENCADMAV DEADFDEAFI ASSKALLITG THFSTEQVNR TSRRALDYAR
RNQVRTVLDI DYRPVLWGLT GKADGETRFV ASEGVTAHLQ RILPLFDLVI GTEEEFRIAG
GKTELVDALA MVRAVTPATL VLKRGPLGCQ IIDGQVPASL DNVPIHGGVE VEVLNVLGAG
DAFASGFLSG WLRDQPLEAC ARAANASGAL VVSRHGCAPA MPTPAELDYF LREAKADPQR
MRRPDRDAAL ARLHRVSPAR KQWDEVLGFA FDHRNQFFEL AQQTGADEAR IARLKGLFVE
AVAQTESALG LQNRIGVLID DRYGQDALNA ATGRGWWIGR PVELPGSVPL VFDHGRSIGT
TLIPWPQEHI AKCLVQFHPD EPIEQRLEQE AQLRALYDAT QASGHELLLE VIPPKHAHLP
QAPDVVYRAL KRLYNIGIYP EWWKLEPMDA AQWRSVDALI AERDPYCRGV VLLGLSAGVE
QLNEGFRAAA QSATCRGFTV GRTIFHEPSH AWLAGEIGDD ELIARVRRTF ETLIASWRAT
RGAGAAQPGT PNPVHQEQAA
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