| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1311 |
|---|
| Symbol | alaS |
|---|
| ID | 4005055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3476782 |
|---|
| End bp | 3479406 |
|---|
| Gene Length | 2625 bp |
|---|
| Protein Length | 874 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637948323 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_559694 |
|---|
| Protein GI | 91784488 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.290938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCG CCGAAATCCG CGAGAAATTC CTCAAGTTCT TCGAATCGAA GGGCCATACG
ATCGTTCGCT CGTCGAGCCT TGTGCCCGGC AACGACCCGA CACTGCTCTT CACCAATTCG
GGAATGGTGC AGTTCAAAGA TGTGTTCCTC GGCGCGGAGT CGCGTCCGTA TTCGCGCGCC
ACGACCGCGC AGCGCAGCGT GCGCGCCGGC GGCAAGCACA ACGACCTGGA AAACGTCGGC
TACACCGCGC GTCACCACAC GTTCTTCGAA ATGCTGGGCA ACTTCTCGTT CGGCGACTAC
TTCAAGCGCG ACGCGATCCA CTACGCGTGG GAACTGCTCA CGGGCGTGTA CCAGTTGCCG
AAAGACAAGC TCTGGGTCAC CGTCTATCAC GAAGACGACG AAGCGCACGA CATCTGGGCG
AAAGAAGTGG GCGTGCCGGT CGAGCGCATC ATCCGCATCG GCGACAACAA GGGCGCGCGC
TACGCGTCGG ACAACTTCTG GCAGATGGCC GACACCGGCC CGTGCGGCCC GTGCTCGGAA
ATCTTCTACG ACCACGGCCC GGACGTGTGG GGCGGCCCCC CGGGGTCTCC TGAAGAAGAC
GGCGACCGCT ACATCGAGAT CTGGAATCTC GTGTTCATGC AGTTCAATCG CGACGCGCAA
GGCAACATGA CGCCGCTGCC CAAGCAGTGC GTCGACACCG GCATGGGTCT GGAGCGTATC
GCCGCGGTGC TGCAGCACGT GCACAGCAAC TATGAGATCG ACCTGTTCCA GGCGCTCATC
AAGGCGGCCG CGCGTGAAAC CGGCGTGAGC GATCTGACCA ACAACTCGCT GAAGGTGATT
GCCGACCACA TCCGCGCGTG CTCGTTCCTG ATCGTCGACG GTGTGATTCC GGGCAACGAA
GGCCGCGGCT ACGTGCTGCG CCGTATCGTG CGCCGCGCAA TCCGTCACGG CTACAAGCTG
GGCAAGAAGG GCTCGTTCTT CCACCGCATG GTGGCCGACC TCGTCGCGCA AATGGGCGCC
GCGTATCCGG AACTGAAGGA AGCTGAACAA CGCGTGACCG ACGTGCTGCG TCAGGAAGAA
GAGCGCTTCT TTGAAACCAT CGAACACGGC ATGTCGATCC TCGAAGGCGC GCTCGCCGAG
CTCGAAGCCG GGAGCAGCAA GACGCTCGAC GGCGAACTCG CATTCAAGCT GCACGACACA
TATGGCTTCC CGCTGGACCT GACGGCAGAC GTGTGCCGCG AGCGCGAAGT GACGGTCGAC
GAAGCCGCCT TCGACGAGGC CATGACGCGT CAGCGCGAAC AGGCTCGCGC GGCAGGCAAG
TTCAAGATGG CGCAAGGGCT CGAATACTCG GGCGAGAAGA CCACGTTCCA CGGTTACGAC
GAAGTCGTTT TCGACGACGC GAAGGTGATC GCGTTGTATG TGGAGGGCGC TTCGGTGCAG
CAGGCAAGCC AGGGGCAGCA GGCCGTCGTC GTGCTGGATC ACACGCCGTT CTATGCGGAG
TCGGGCGGCC AGGTCGGCGA CCAGGGCGTG CTGGCCAACG CGAGCGTGCG CTTCGCGGTG
AGCGATACGC TGAAGGTGCA GGCCGACGTG GTCGGTCATC ACGGCACGCT CGAACAGGGC
ACGCTGAAAG TGGGCGACGT CGTCAAGGCG GAAATCGACG CGGTGCGCCG CGCCCGCACG
GCTCGCAACC ACTCGGCCAC GCACCTGATG CACAAGGCGT TGCGCGAAGT GCTCGGCACC
CACGTGCAGC AGAAGGGATC GCTCGTGGAC GCGGACAAGA CCCGTTTCGA CTTCGCGCAC
AACGCGCCGT TGACCGACGA GCAGATCCGC CGTGTCGAGG AAATCGTCAA CGCCGAGGTG
CTGGCGAACG CGCCGGGCAT CGTGCGCGTC ATGTCGTTCG ACGAGGCAGT GAAGGGCGGC
GCAATGGCGC TGTTCGGCGA GAAGTACGGC GACGAAGTCC GCGTGCTCGA TCTGGGCTTT
TCACGCGAAT TGTGCGGCGG TACGCACGTG CATCGCACCG GCGACATCGG CCTCTTCAAG
ATCGTGATGG AAGGCGGCGT GGCGGCGGGC ATCCGGCGCG TGGAAGCGAT TACGGGCGAC
AACGCCGTGC GCTTCGTGCA GGATCTCGAC GCGCGCATCA ACGCGGCTGC CGCTGTGTTG
AAGGCGCAGC CTTCGGAGCT GACGCAGCGC ATCGTGCAGG TGCAGGACCA GGTGAAGTCG
CTGGAAAAGG AACTGAGCGC GCTGAAGTCG AAAATGGCGT CGAGCCAGGG CGACGAACTG
GCCGGTCAGG CGATCGAAGT CGGCGGCGTG CACGTGCTGG CGGCCACGCT CGAAGGCGCG
GACGTGAAGA CGCTGCGTGA AACCGTCGAC AAGCTGAAGG ACAAGCTCAA GAGTGCGGCG
ATCGTGCTGG CTTCGGTCGA AGGCGGCAAG GTGAGCCTGA TTGCCGGCGT CACGGCGGAC
GCAAGCAGGA AGGTCAAGGC GGGCGAGCTG GTTAACTTCG TGGCGCAGCA AGTTGGCGGC
AAGGGCGGTG GCCGTCCGGA TATGGCGCAG GCTGGCGGCA CCGAGCCGGC GAATCTGCCG
GCGGCACTGG CCGGCGTCAA GGGCTGGGTC GAAAGCCAGC TTTGA
|
|---|
| Protein sequence | MKAAEIREKF LKFFESKGHT IVRSSSLVPG NDPTLLFTNS GMVQFKDVFL GAESRPYSRA
TTAQRSVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKRDAIHYAW ELLTGVYQLP
KDKLWVTVYH EDDEAHDIWA KEVGVPVERI IRIGDNKGAR YASDNFWQMA DTGPCGPCSE
IFYDHGPDVW GGPPGSPEED GDRYIEIWNL VFMQFNRDAQ GNMTPLPKQC VDTGMGLERI
AAVLQHVHSN YEIDLFQALI KAAARETGVS DLTNNSLKVI ADHIRACSFL IVDGVIPGNE
GRGYVLRRIV RRAIRHGYKL GKKGSFFHRM VADLVAQMGA AYPELKEAEQ RVTDVLRQEE
ERFFETIEHG MSILEGALAE LEAGSSKTLD GELAFKLHDT YGFPLDLTAD VCREREVTVD
EAAFDEAMTR QREQARAAGK FKMAQGLEYS GEKTTFHGYD EVVFDDAKVI ALYVEGASVQ
QASQGQQAVV VLDHTPFYAE SGGQVGDQGV LANASVRFAV SDTLKVQADV VGHHGTLEQG
TLKVGDVVKA EIDAVRRART ARNHSATHLM HKALREVLGT HVQQKGSLVD ADKTRFDFAH
NAPLTDEQIR RVEEIVNAEV LANAPGIVRV MSFDEAVKGG AMALFGEKYG DEVRVLDLGF
SRELCGGTHV HRTGDIGLFK IVMEGGVAAG IRRVEAITGD NAVRFVQDLD ARINAAAAVL
KAQPSELTQR IVQVQDQVKS LEKELSALKS KMASSQGDEL AGQAIEVGGV HVLAATLEGA
DVKTLRETVD KLKDKLKSAA IVLASVEGGK VSLIAGVTAD ASRKVKAGEL VNFVAQQVGG
KGGGRPDMAQ AGGTEPANLP AALAGVKGWV ESQL
|
|---|
| |