Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1296 |
Symbol | |
ID | 4003267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 3495261 |
End bp | 3495977 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637948339 |
Product | peptidoglycan-binding LysM/peptidase M23B |
Protein accession | YP_559709 |
Protein GI | 91784503 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.775372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.108769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAGTA GAAGAAGAAT GATGAAACGG CTCGCCTGCG CGTCGTTGGT GGCACTGCTC GCCGCGTGCG GGTCAGCGCC GGTGGGACCG GGCTTTTATC GGGTGGAACG GGGCGATACG CTGTCGAAGA TCGCGCGCAG CAACCGGCAA TCGGTGCAAA GCATCGTGCG CTGGAACAAT CTGACCAATC CGGACAGCAT CGAGGTCGGC CAGGTCCTGC GCGTCGCGCC GCCGGGCGGT GCTGCGTCGA CCAGTGGCGC CGTGCGCAGC AGCGGCAACG CAAGCAGCAG CGCTTCGGCG GCGCCGCGGC CAGCGCCCGC GGACAGCGCG CCGTCCGCGC CGCCGGCGTC GACGATTTCG CTGGTATGGC CGGCCGACGG CACGGTCATC CGGCGTTTCG ACGGCAGCAG TTCGAAGGGC ATCGATATCT CGGCGGCGGC GGGCACGCCC GTGGTCGCCG CGGCGCCCGG TACGGTGGTC TACGCGGGCA ATGGCCTGCG CGGCTACGGC AATCTGCTGA TCATCAAACA CAACGCCGAG TATCTGACCG CCTATGCGCA CAACCGCGTG CTGCTGGTGA AGGAAGGCCA GTCGGTCACG CGCGGCGAAA AAATTGCCGA GATGGGCGAC ACGGATACCG ACCGCGTGAT GCTGCACTTC GAACTGCGTT ATCAGGGCCG TTCGATCGAT CCGTCACGGG CGCTGCCGCC TCGCTAA
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Protein sequence | MLSRRRMMKR LACASLVALL AACGSAPVGP GFYRVERGDT LSKIARSNRQ SVQSIVRWNN LTNPDSIEVG QVLRVAPPGG AASTSGAVRS SGNASSSASA APRPAPADSA PSAPPASTIS LVWPADGTVI RRFDGSSSKG IDISAAAGTP VVAAAPGTVV YAGNGLRGYG NLLIIKHNAE YLTAYAHNRV LLVKEGQSVT RGEKIAEMGD TDTDRVMLHF ELRYQGRSID PSRALPPR
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