Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1223 |
Symbol | |
ID | 4003843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 3568368 |
End bp | 3570380 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637948417 |
Product | DNA topoisomerase III |
Protein accession | YP_559782 |
Protein GI | 91784576 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.183641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTGT TCTTGTGCGA GAAGCCCTCC CAGGGCAAAG ACATTGGCCG GATTCTCGGC GCCACGCAGC GCGGTGAAGG CTGTCTCAAC GGTTCCGGCG TCACTGTCAC CTGGTGCATC GGCCATCTCG TAGAAGCCGC TGCGCCCGAA GCCTACGACG AGCAGTTGAA GCGCTGGTCC ATTGAGCAGT TGCCCATCAT TCCCCAGAAT TGGCGGGTCG AGGTCAAACC GAAGACCGCC ACGCAATTCA AGGTCGTCAA GGCGCTTCTG GCGAAGGCGA CCCAGCTTGT CATCGCCACC GATGCCGACC GCGAAGGCGA GTTGATCGCT CGCGAGATCA TCGAACTGTG CGGCTACCGC GGCCCCATCG AGCGGCTATG GTTGTCGGCA CTCAACGATG CGTCCATCCG CGCCGCACTG GGCAAGCTCA GGCCATCGGC CGAGACGCTG CCGATGTACT ACTCGGCGCT GGCACGATCG CGGGCCGACT GGCTCGTGGG AATGAACCTC AGCCGCCTGT TCACCGTGCT CGGTCGACAA GCGGGCTACG ACGGCGTGCT GTCGGTCGGC CGCGTGCAGA CACCGACGCT CAAGCTCGTG GTGGACCGCG ACCGCGAAAT TGCGGCCTTC GTGTCCGTAC CGTACTGGGC CATCGACGTG TCCCTGTCCG CAAGCGGCCA GTCTTTCACC GCGCAATGGG TTCCGCCCGA TGCCTACACC GACGACACGG GCCGCTGCCT GCAGCAGCCG GTCGCACAGC GGGCCGCGCA GCAGATTCGC GGCGCGGGCA GCGCGCAGGT GGTGTCGGTC GAGACCGAGC GCGTGCGCGA AGGCCCGCCG CTGCTGTTCG ACCTGGGCAC CTTGCAGGAG GTTTGTTCCA AGCAACTTGG GCTGGACGTG CAGGAAACCC TGGAGATCGC CCAGGCCCTG TACGAGACGC ACAAAGCCAC GACGTACCCG CGCTCGGATT CCGGCTATCT GCCCGAAAGC ATGTTCGCCG AGGTGTCCAC GGTTCTCGAC AGTCTGCTCA GGACCGATCC CTCGCTGCGC CCGATCATGG ACCAGCTCGA CCGCTCCCAG CGCTCGCGTG CATGGAATGA CGGCAAGGTC ACGGCGCACC ACGGCATCAT TCCGACGCTC GAACCAGCGA ACCTCTCGGC CATGAGCGAG AAGGAGTTGG CGGTGTACCG GCTGATCCGG GCGCATTACC TCGCGCAGTT CCTCCCTCAC CACGAGTTCG ATCGCACCGT GGCGAACCTA GCCTGCGGCC AGCAGAAACT GGCGGCCACG GGCAAGCAGG TCGTGGTGAA GGGCTGGCCC CTGGTACTGA CCGAGCCTCA GCCCGACGAG GACGGCGACG CTGCGGCGCG CAGCCAGGTG CTTCCCGCGC TGCGCGAGGG CTTGGCATGT CTGGTGGCCG ACGTCGATCT GAAGGCGCTC AAGACGCTGC CACCCAGGCC GTACACGCAG GGCGAACTTG TCAAATCCAT GAAGGGAGTC GCCAAGCTGG TGACGGACCC GCGCCTGAAG CAGAAGTTCA GGGACACGGT CGGCATCGGC ACCGAAGCGA CGCGAGCCAA CATCATCAGC GGCCTGATCG CACGCGGCTA TATCGTGAAG AAGGGGCGCG CCATCCGCGC ATCCGATGCT GCTTTCACAC TGATCGACGC CGTGCCCGCG GCGATCGCCG ACCCTGGCAC TACCGCTGTC TGGGAACAGG CGCTCGACAT GATCGAAGCT GGACAGCTTA CGCTGGACGT ATTCATCGGA AAGCAGGCTG CATGGATTTC GCAGTTGATC GCGCAGTACA GCATCGCGTC CCTGTCCATC AAGGTTCCCC AAGGGCCGGC ATGCCCGCAG TGCGGCGCAC CCACGCGTCA GCGCAGCGGC AAGAGCGGCC CGTTTTGGTC GTGCAGTCGT TACCCCGACT GCAAAGGCAC GCTGCCGGTC GAATCCGGCA CGTCCAAGCG CGGTGCCTCG CGCCCGCACC GCAGCGGCCG CCAAGGTTCC TGA
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Protein sequence | MRLFLCEKPS QGKDIGRILG ATQRGEGCLN GSGVTVTWCI GHLVEAAAPE AYDEQLKRWS IEQLPIIPQN WRVEVKPKTA TQFKVVKALL AKATQLVIAT DADREGELIA REIIELCGYR GPIERLWLSA LNDASIRAAL GKLRPSAETL PMYYSALARS RADWLVGMNL SRLFTVLGRQ AGYDGVLSVG RVQTPTLKLV VDRDREIAAF VSVPYWAIDV SLSASGQSFT AQWVPPDAYT DDTGRCLQQP VAQRAAQQIR GAGSAQVVSV ETERVREGPP LLFDLGTLQE VCSKQLGLDV QETLEIAQAL YETHKATTYP RSDSGYLPES MFAEVSTVLD SLLRTDPSLR PIMDQLDRSQ RSRAWNDGKV TAHHGIIPTL EPANLSAMSE KELAVYRLIR AHYLAQFLPH HEFDRTVANL ACGQQKLAAT GKQVVVKGWP LVLTEPQPDE DGDAAARSQV LPALREGLAC LVADVDLKAL KTLPPRPYTQ GELVKSMKGV AKLVTDPRLK QKFRDTVGIG TEATRANIIS GLIARGYIVK KGRAIRASDA AFTLIDAVPA AIADPGTTAV WEQALDMIEA GQLTLDVFIG KQAAWISQLI AQYSIASLSI KVPQGPACPQ CGAPTRQRSG KSGPFWSCSR YPDCKGTLPV ESGTSKRGAS RPHRSGRQGS
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