| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1078 |
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| Symbol | |
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| ID | 4005413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3702414 |
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| End bp | 3703013 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637948556 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_559920 |
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| Protein GI | 91784714 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.478507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGAAA AAGAAATTGA TCAGGTGCTG GTCGAGCGCG TCCAGAAGGG CGACAAGGCC
GCGTTCGAGC TTCTGGTCTC CAAATACCAC CGCAAGATCC TCCGGCTGAT CTCACGCCTC
GTGCGGGACC CCGCCGAGGT GGAAGACGTC GCTCAGGACG CCTTTATCAA GGCGTACCGG
GCGTTGCCGC AGTTTCGCGG GGAGTCGGCC TTTTATACGT GGTTGTACCG GATTGCCGTC
AACACGGCAA AGAACTACCT TGCGACCCAA GGGCGGCGCG CGCCGACCTC GACCGAAGCA
GATGCTGAAG AAGCTGAAAC TTTCTCGGAC GCGGACCAAC TAAGGGATAT CAACACGCCT
GAGTCGATGT TGATGAGCAA GCAGATCGCT GAGACGGTCA ATGCTGCGAT GGCGGTTTTA
CCGGAAGAGT TGCGCACCGC CATTACTCTT CGTGAAATTG AAGGTTTGAG CTACGAGGAA
ATCGCTGAGA TGATGGGTTG CCCAATCGGC ACAGTCAGAT CACGAATTTT CCGTGCTCGC
GAAGCCATTG CGGCAAAATT GCGTCCGTTA CTTGACACAC CTGAAGGCAA GCGCTGGTGA
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| Protein sequence | MSEKEIDQVL VERVQKGDKA AFELLVSKYH RKILRLISRL VRDPAEVEDV AQDAFIKAYR
ALPQFRGESA FYTWLYRIAV NTAKNYLATQ GRRAPTSTEA DAEEAETFSD ADQLRDINTP
ESMLMSKQIA ETVNAAMAVL PEELRTAITL REIEGLSYEE IAEMMGCPIG TVRSRIFRAR
EAIAAKLRPL LDTPEGKRW
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