Gene Bxe_A1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A1062 
Symbol 
ID4005430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp3716209 
End bp3719499 
Gene Length3291 bp 
Protein Length1096 aa 
Translation table11 
GC content66% 
IMG OID637948573 
Productribonuclease E 
Protein accessionYP_559937 
Protein GI91784731 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000580995 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA TGTTGTTCAA CGCGACGCAG CAGGAAGAAC TGCGCGTCGC CATCGTCGAT 
GGGCAAAAAC TCATCGATAT CGACATCGAA ACCGCCGGGC GCGAACAGCG CAAAGGCAAT
ATTTACAAGG GCATCATTAC CCGCATCGAG CCTTCGCTCG AAGCCTGTTT CGTCAACTAC
GGCGAAGACC GCCACGGCTT CCTGCCGTTC AAGGAAGTCG CCCGCCAGTA TTTCCGCGAC
GGCGTCGACA TGCGCTCGGC GCGCATCCAG GACGCCCTCC GTGAAGGCCA GGAACTGATC
GTTCAGGTCG AAAAGGAAGA GCGCGGCAAC AAGGGCGCAG CCCTCACCAC CTTCATCTCG
CTCGCCGGCC GGTATCTGGT TCTGATGCCG AACAACCCGC GCGGCGGCGG CGTGTCGCGC
CGGATCGAAG GCGACGACCG TCAGGAACTT CGCGAAACCA TGGCGCAGCT GCAATTGCCG
GAAGGCATGA GCATCATCGC GCGCACGGCC GGCATTGGCC GCAGCGCCGA AGAGCTGCAG
TGGGACCTGA ACTACCTGAT GCAATTGTGG CGCGCCATCG AAGCCGCGTC GCAAAGCGGT
TCGAGCGGCC AGCCGATGCT GATCTATCTC GAATCGAGCC TCGTGATCCG CGCGATTCGC
GACTATTTCC AGCCGGATAT CGGCGAAATC CTGATCGACA CCACCGAAAT TCATGACCAG
GCACGCGCCT TCATGGATAT CGTGATGCCG GACAATGTCA GCAAGGTGAA GCGGTATCAC
GACGACGTGC CGCTCTTCTC GCGCTTCCAG ATCGAACACC AGATCGAAAC CGCGTATTCG
CGCACGGTGC CGCTGCCCTC GGGCGGCGCG ATCGTGATCG ACCACACCGA AGCACTGGTC
GCGATCGACG TGAACTCGGC CCGCGCCACC AAGGGCGCCG ACATCGAGGA AACCGCCGCG
CGCACCAACC TCGAAGCTGC CGACGAAGTC GCCCGCCAGT TGCGCCTGCG CGATCTGGGC
GGCCTGATCG TGATCGACTT CATCGACATG GAATCGGCCA AGAGCCAGCG CGAAGTCGAG
CAACGCCTGA AAGACGCGCT CAAGCACGAC CGTGCGCGCG TCCAGATGGG CAAGATCTCA
CGTTTCGGCC TGATGGAACT GTCGCGTCAG CGTCTGCGTC CGGCGCTGTC CGAAGGCAGC
CATGTGACCT GCCCGCGCTG CAACGGCACG GGTCATATTC GCGATACCGA ATCGTCCGCG
CTGCAAGTGC TGCGGATCAT TCAGGAAGAA GCAATGAAGG AAAACACCGC GGCAATTCAT
TGCCAGGTGC CGGTCGAAGT CACTGCCTTC CTGCTGAACG AAAAGCGCGC TGAAATCAAC
AAGATCGAGT CGCGTTTCAA AGTCAATGTC GTCCTGATTC CGAACAAGCA TCTCGACACG
CCGCATTACA AGCTCGAGCG TCTGCGTCAC GACGACGCGC GCCTCGACGA ACCGCGCGCT
TCGTGGAAGA TGGCCGAAGA AGCGGCCCGC GAACTCGAAT CGGAAACCGG CTACAGCAAG
CGCACCGAAG AAGTGAAGCC GAAGCAGGAA GCGGCGGTCA AGGGCATCAC GCCTGAAAAA
CCGGCGCCGA GCGCGCCGGT TCGACCGGTC GCCGCCCCGG CTCCGGTCGC GGTCACGCCG
GCGAGCGGCG GCTTTATCGG CTGGTTGAAG AATCTGTTCG GCATGCAGCC GGCGGCACCG
GCGCCCGCTG CGCCGGCTAC GACCGACAAA CAGACGCGTC CGCAGCGCAG CGAACGCACG
GAGCGCGGTG AGCGCACCGG CGAACGCGGC GGCGAGCGCA ACCGCAACCG CCGTGGCGGC
GCAGGCGGCC GCGACGCAGC GGGCCGTGGC GAAGGCACGA CCGCCACCGG CGGCCGTCCG
GTTCAGGGCC AGCAGTCGTC GCAGCGCCGC GAGGAACGCG AACCGCGTGA AGCGCGCGAA
GGGCGTGAAG CACGCGAGCC GCGTGGCAAC CGTGAGCCGC GTGAGGCCCG CGAAGGCCGT
GAACCGCGCG AAACGCGCGA AACGCGTGAA CCACGTGAAA GTCGCGAGGG CCGCGAGAAC
CGCGATCGCG ACAACCGCGG CAACGAGCGT GCGGAAACCG TCGAGGGCGC ACCGCGCGCC
GAACGTGGCG AGCGTCCGGA GCGTGGCGAA CGCCGTGAAC GGGGCGAACG TGCCGAGCGC
GGCGAACGCC GCAAGCCGCA AGCGGAAGCC GCGGACGCAC TGACCCAGAG CGACGCGCAA
ACGGCGGAAG AACTGGCGCA AAACCAGACC GCCTTGGGCG AAAACGGCGC GCCGGTCGAT
CAGGAAGCCG TGGCGCGTGA AGGTGAAGAG CGCCGCCGCC GCCGTCGCGG CCGTCGTGGC
GGCCGTCGCG AGCGCGAAGA AGACGTGAAC GGCAACCTGG CAGCGGACGT CGCGGAAGCT
GAAGGCGAGA ACGCCGCCGT GACCGACGAA GCGCAGGTGC TCACCGCACG TCAGCCCGTC
GAGCGCAAAA CGGAAGCCAA CGAGGCGAAG GACGTGACAC CGGTGGAGGT GGTGGTCGCT
GCTGTCGCGA CTGAAACCGC CGTGGTCAGC GAACTGCACG CTGCGACCGA AACGCCGGCT
CTCGCCGTCG AGAAGGCAGC GAAGGCGGAA GCGGTTGTCC CGGTGGCGCA AGCGCCGGCG
GCTACGGCAG TCGCCGAGCC GGTTGCCGAA ACGGTTGCGC CGGCCGCTGC CGCGCCGGTC
GAAGCCGCGC AAGCTGTGCC GGCCGCCAGC GAAACGGTTT CGCCGGCTGA ACCGGTCGCA
CGTGTCGAAG CGCCGGCTCA GGCCGAGCCC GAAGCGCCGG CAGTTACGCC GTCGCCGGTC
GAAGCGCACG CCGCGCCGGC TCCGATCGAA ACCGCGGCTC CGGCGGCGGT GGTCGAAGCA
CAGGCCATTC AGCCTGCGCC GCATGCCGGG ATCGTTGAAG CGCAGCCGGT CGTGGCCGGC
GCTGCAACGG TGGTCGAGCC GGTAGTGGCC GAATCCGCGC CGGTAGCCGC CGTCGCGCCA
CAGGCACCGC AGCCAGCACG TCATGACGCC GTGTCGGCGG AAGCTCTGAA GCCGGTGCTG
GAACAAGCCG GTCTCGTCTG GGTGAACACC GACGCCGACA AGCTGCGTGC GGCTCAGGAA
GCGGCTGCGC AGACCGTCAA GCCGGCTCGC GTAGTACGCG AACGTAAATC GTTGCCGCCG
CTCGACAGCG CGCCGATGCA ACAAGTGGAA ACGGGCAAGC ACGCGCAGTA A
 
Protein sequence
MKRMLFNATQ QEELRVAIVD GQKLIDIDIE TAGREQRKGN IYKGIITRIE PSLEACFVNY 
GEDRHGFLPF KEVARQYFRD GVDMRSARIQ DALREGQELI VQVEKEERGN KGAALTTFIS
LAGRYLVLMP NNPRGGGVSR RIEGDDRQEL RETMAQLQLP EGMSIIARTA GIGRSAEELQ
WDLNYLMQLW RAIEAASQSG SSGQPMLIYL ESSLVIRAIR DYFQPDIGEI LIDTTEIHDQ
ARAFMDIVMP DNVSKVKRYH DDVPLFSRFQ IEHQIETAYS RTVPLPSGGA IVIDHTEALV
AIDVNSARAT KGADIEETAA RTNLEAADEV ARQLRLRDLG GLIVIDFIDM ESAKSQREVE
QRLKDALKHD RARVQMGKIS RFGLMELSRQ RLRPALSEGS HVTCPRCNGT GHIRDTESSA
LQVLRIIQEE AMKENTAAIH CQVPVEVTAF LLNEKRAEIN KIESRFKVNV VLIPNKHLDT
PHYKLERLRH DDARLDEPRA SWKMAEEAAR ELESETGYSK RTEEVKPKQE AAVKGITPEK
PAPSAPVRPV AAPAPVAVTP ASGGFIGWLK NLFGMQPAAP APAAPATTDK QTRPQRSERT
ERGERTGERG GERNRNRRGG AGGRDAAGRG EGTTATGGRP VQGQQSSQRR EEREPREARE
GREAREPRGN REPREAREGR EPRETRETRE PRESREGREN RDRDNRGNER AETVEGAPRA
ERGERPERGE RRERGERAER GERRKPQAEA ADALTQSDAQ TAEELAQNQT ALGENGAPVD
QEAVAREGEE RRRRRRGRRG GRREREEDVN GNLAADVAEA EGENAAVTDE AQVLTARQPV
ERKTEANEAK DVTPVEVVVA AVATETAVVS ELHAATETPA LAVEKAAKAE AVVPVAQAPA
ATAVAEPVAE TVAPAAAAPV EAAQAVPAAS ETVSPAEPVA RVEAPAQAEP EAPAVTPSPV
EAHAAPAPIE TAAPAAVVEA QAIQPAPHAG IVEAQPVVAG AATVVEPVVA ESAPVAAVAP
QAPQPARHDA VSAEALKPVL EQAGLVWVNT DADKLRAAQE AAAQTVKPAR VVRERKSLPP
LDSAPMQQVE TGKHAQ