Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1062 |
Symbol | |
ID | 4005430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 3716209 |
End bp | 3719499 |
Gene Length | 3291 bp |
Protein Length | 1096 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637948573 |
Product | ribonuclease E |
Protein accession | YP_559937 |
Protein GI | 91784731 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000580995 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA TGTTGTTCAA CGCGACGCAG CAGGAAGAAC TGCGCGTCGC CATCGTCGAT GGGCAAAAAC TCATCGATAT CGACATCGAA ACCGCCGGGC GCGAACAGCG CAAAGGCAAT ATTTACAAGG GCATCATTAC CCGCATCGAG CCTTCGCTCG AAGCCTGTTT CGTCAACTAC GGCGAAGACC GCCACGGCTT CCTGCCGTTC AAGGAAGTCG CCCGCCAGTA TTTCCGCGAC GGCGTCGACA TGCGCTCGGC GCGCATCCAG GACGCCCTCC GTGAAGGCCA GGAACTGATC GTTCAGGTCG AAAAGGAAGA GCGCGGCAAC AAGGGCGCAG CCCTCACCAC CTTCATCTCG CTCGCCGGCC GGTATCTGGT TCTGATGCCG AACAACCCGC GCGGCGGCGG CGTGTCGCGC CGGATCGAAG GCGACGACCG TCAGGAACTT CGCGAAACCA TGGCGCAGCT GCAATTGCCG GAAGGCATGA GCATCATCGC GCGCACGGCC GGCATTGGCC GCAGCGCCGA AGAGCTGCAG TGGGACCTGA ACTACCTGAT GCAATTGTGG CGCGCCATCG AAGCCGCGTC GCAAAGCGGT TCGAGCGGCC AGCCGATGCT GATCTATCTC GAATCGAGCC TCGTGATCCG CGCGATTCGC GACTATTTCC AGCCGGATAT CGGCGAAATC CTGATCGACA CCACCGAAAT TCATGACCAG GCACGCGCCT TCATGGATAT CGTGATGCCG GACAATGTCA GCAAGGTGAA GCGGTATCAC GACGACGTGC CGCTCTTCTC GCGCTTCCAG ATCGAACACC AGATCGAAAC CGCGTATTCG CGCACGGTGC CGCTGCCCTC GGGCGGCGCG ATCGTGATCG ACCACACCGA AGCACTGGTC GCGATCGACG TGAACTCGGC CCGCGCCACC AAGGGCGCCG ACATCGAGGA AACCGCCGCG CGCACCAACC TCGAAGCTGC CGACGAAGTC GCCCGCCAGT TGCGCCTGCG CGATCTGGGC GGCCTGATCG TGATCGACTT CATCGACATG GAATCGGCCA AGAGCCAGCG CGAAGTCGAG CAACGCCTGA AAGACGCGCT CAAGCACGAC CGTGCGCGCG TCCAGATGGG CAAGATCTCA CGTTTCGGCC TGATGGAACT GTCGCGTCAG CGTCTGCGTC CGGCGCTGTC CGAAGGCAGC CATGTGACCT GCCCGCGCTG CAACGGCACG GGTCATATTC GCGATACCGA ATCGTCCGCG CTGCAAGTGC TGCGGATCAT TCAGGAAGAA GCAATGAAGG AAAACACCGC GGCAATTCAT TGCCAGGTGC CGGTCGAAGT CACTGCCTTC CTGCTGAACG AAAAGCGCGC TGAAATCAAC AAGATCGAGT CGCGTTTCAA AGTCAATGTC GTCCTGATTC CGAACAAGCA TCTCGACACG CCGCATTACA AGCTCGAGCG TCTGCGTCAC GACGACGCGC GCCTCGACGA ACCGCGCGCT TCGTGGAAGA TGGCCGAAGA AGCGGCCCGC GAACTCGAAT CGGAAACCGG CTACAGCAAG CGCACCGAAG AAGTGAAGCC GAAGCAGGAA GCGGCGGTCA AGGGCATCAC GCCTGAAAAA CCGGCGCCGA GCGCGCCGGT TCGACCGGTC GCCGCCCCGG CTCCGGTCGC GGTCACGCCG GCGAGCGGCG GCTTTATCGG CTGGTTGAAG AATCTGTTCG GCATGCAGCC GGCGGCACCG GCGCCCGCTG CGCCGGCTAC GACCGACAAA CAGACGCGTC CGCAGCGCAG CGAACGCACG GAGCGCGGTG AGCGCACCGG CGAACGCGGC GGCGAGCGCA ACCGCAACCG CCGTGGCGGC GCAGGCGGCC GCGACGCAGC GGGCCGTGGC GAAGGCACGA CCGCCACCGG CGGCCGTCCG GTTCAGGGCC AGCAGTCGTC GCAGCGCCGC GAGGAACGCG AACCGCGTGA AGCGCGCGAA GGGCGTGAAG CACGCGAGCC GCGTGGCAAC CGTGAGCCGC GTGAGGCCCG CGAAGGCCGT GAACCGCGCG AAACGCGCGA AACGCGTGAA CCACGTGAAA GTCGCGAGGG CCGCGAGAAC CGCGATCGCG ACAACCGCGG CAACGAGCGT GCGGAAACCG TCGAGGGCGC ACCGCGCGCC GAACGTGGCG AGCGTCCGGA GCGTGGCGAA CGCCGTGAAC GGGGCGAACG TGCCGAGCGC GGCGAACGCC GCAAGCCGCA AGCGGAAGCC GCGGACGCAC TGACCCAGAG CGACGCGCAA ACGGCGGAAG AACTGGCGCA AAACCAGACC GCCTTGGGCG AAAACGGCGC GCCGGTCGAT CAGGAAGCCG TGGCGCGTGA AGGTGAAGAG CGCCGCCGCC GCCGTCGCGG CCGTCGTGGC GGCCGTCGCG AGCGCGAAGA AGACGTGAAC GGCAACCTGG CAGCGGACGT CGCGGAAGCT GAAGGCGAGA ACGCCGCCGT GACCGACGAA GCGCAGGTGC TCACCGCACG TCAGCCCGTC GAGCGCAAAA CGGAAGCCAA CGAGGCGAAG GACGTGACAC CGGTGGAGGT GGTGGTCGCT GCTGTCGCGA CTGAAACCGC CGTGGTCAGC GAACTGCACG CTGCGACCGA AACGCCGGCT CTCGCCGTCG AGAAGGCAGC GAAGGCGGAA GCGGTTGTCC CGGTGGCGCA AGCGCCGGCG GCTACGGCAG TCGCCGAGCC GGTTGCCGAA ACGGTTGCGC CGGCCGCTGC CGCGCCGGTC GAAGCCGCGC AAGCTGTGCC GGCCGCCAGC GAAACGGTTT CGCCGGCTGA ACCGGTCGCA CGTGTCGAAG CGCCGGCTCA GGCCGAGCCC GAAGCGCCGG CAGTTACGCC GTCGCCGGTC GAAGCGCACG CCGCGCCGGC TCCGATCGAA ACCGCGGCTC CGGCGGCGGT GGTCGAAGCA CAGGCCATTC AGCCTGCGCC GCATGCCGGG ATCGTTGAAG CGCAGCCGGT CGTGGCCGGC GCTGCAACGG TGGTCGAGCC GGTAGTGGCC GAATCCGCGC CGGTAGCCGC CGTCGCGCCA CAGGCACCGC AGCCAGCACG TCATGACGCC GTGTCGGCGG AAGCTCTGAA GCCGGTGCTG GAACAAGCCG GTCTCGTCTG GGTGAACACC GACGCCGACA AGCTGCGTGC GGCTCAGGAA GCGGCTGCGC AGACCGTCAA GCCGGCTCGC GTAGTACGCG AACGTAAATC GTTGCCGCCG CTCGACAGCG CGCCGATGCA ACAAGTGGAA ACGGGCAAGC ACGCGCAGTA A
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Protein sequence | MKRMLFNATQ QEELRVAIVD GQKLIDIDIE TAGREQRKGN IYKGIITRIE PSLEACFVNY GEDRHGFLPF KEVARQYFRD GVDMRSARIQ DALREGQELI VQVEKEERGN KGAALTTFIS LAGRYLVLMP NNPRGGGVSR RIEGDDRQEL RETMAQLQLP EGMSIIARTA GIGRSAEELQ WDLNYLMQLW RAIEAASQSG SSGQPMLIYL ESSLVIRAIR DYFQPDIGEI LIDTTEIHDQ ARAFMDIVMP DNVSKVKRYH DDVPLFSRFQ IEHQIETAYS RTVPLPSGGA IVIDHTEALV AIDVNSARAT KGADIEETAA RTNLEAADEV ARQLRLRDLG GLIVIDFIDM ESAKSQREVE QRLKDALKHD RARVQMGKIS RFGLMELSRQ RLRPALSEGS HVTCPRCNGT GHIRDTESSA LQVLRIIQEE AMKENTAAIH CQVPVEVTAF LLNEKRAEIN KIESRFKVNV VLIPNKHLDT PHYKLERLRH DDARLDEPRA SWKMAEEAAR ELESETGYSK RTEEVKPKQE AAVKGITPEK PAPSAPVRPV AAPAPVAVTP ASGGFIGWLK NLFGMQPAAP APAAPATTDK QTRPQRSERT ERGERTGERG GERNRNRRGG AGGRDAAGRG EGTTATGGRP VQGQQSSQRR EEREPREARE GREAREPRGN REPREAREGR EPRETRETRE PRESREGREN RDRDNRGNER AETVEGAPRA ERGERPERGE RRERGERAER GERRKPQAEA ADALTQSDAQ TAEELAQNQT ALGENGAPVD QEAVAREGEE RRRRRRGRRG GRREREEDVN GNLAADVAEA EGENAAVTDE AQVLTARQPV ERKTEANEAK DVTPVEVVVA AVATETAVVS ELHAATETPA LAVEKAAKAE AVVPVAQAPA ATAVAEPVAE TVAPAAAAPV EAAQAVPAAS ETVSPAEPVA RVEAPAQAEP EAPAVTPSPV EAHAAPAPIE TAAPAAVVEA QAIQPAPHAG IVEAQPVVAG AATVVEPVVA ESAPVAAVAP QAPQPARHDA VSAEALKPVL EQAGLVWVNT DADKLRAAQE AAAQTVKPAR VVRERKSLPP LDSAPMQQVE TGKHAQ
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