Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A1008 |
Symbol | trmD |
ID | 4003984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | - |
Start bp | 3774601 |
End bp | 3775368 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637948629 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_559991 |
Protein GI | 91784785 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.981578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.871422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTCG ATGTCGTCAC GCTCTTTCCT GACATGTTTC GTGCGCTGAC CGACTGGGGT ATCACCAGCC GTGCGGCGAA GCAGGAGCGC TACAGTTTGC GTACGTGGAA TCCGCGCGAT TTCACGACCG ACAACTACCG CACAATCGAC GATCGCCCGT ACGGCGGCGG CCCCGGCATG GTGATGCTGG CGAGGCCGCT GGAAGACGCG ATCGGCGCGG CGAAAGCGGC GCAGGCGGAG CAGGGCATTG GCGCCCCGCG CGTCGTGATG ATGTCGCCGC AAGGTGTCAC GCTGAATCAC GACCGTGTCA TGCGGTTTGC TGCCGAGCCT GGCCTGATCC TGTTGTGCGG GCGCTATGAA GCGATCGACC AGCGTTTGCT CGACCGTGTC GTCGACGAAG AAGTCAGCCT TGGCGACTTC GTGCTGTCAG GCGGCGAATT GCCGGCTATG GCGTTGATGG ATGCCGTGGT GCGTCAGTTG CCCGGTGTGC TCAACGACTC GCAGTCTGCG GTGCAGGACA GTTTTGTCGA CGTGCTGCTG GATTGTCCGC ATTACACGCG CCCCGAGGAA TACAACGGCG TGCGTGTTCC AGATGTGCTG CTCGGCGGCC ATCATGCGGA GATCGAAACG TGGCGTCGGC GTGAAGCCTT GCGCAACACG TTGAACAAAC GGCCCGATCT GATCGTGAAG GCCAGAAAGA ACAAGATGTT GAGCCGTGCC GACGAGGCAT GGCTCGCGAG TCTCGCGAAG GAAGAGTCGA AGGCGTAA
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Protein sequence | MQFDVVTLFP DMFRALTDWG ITSRAAKQER YSLRTWNPRD FTTDNYRTID DRPYGGGPGM VMLARPLEDA IGAAKAAQAE QGIGAPRVVM MSPQGVTLNH DRVMRFAAEP GLILLCGRYE AIDQRLLDRV VDEEVSLGDF VLSGGELPAM ALMDAVVRQL PGVLNDSQSA VQDSFVDVLL DCPHYTRPEE YNGVRVPDVL LGGHHAEIET WRRREALRNT LNKRPDLIVK ARKNKMLSRA DEAWLASLAK EESKA
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