| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A1001 |
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| Symbol | |
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| ID | 4003991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 3780470 |
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| End bp | 3781759 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637948636 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_559998 |
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| Protein GI | 91784792 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.835424 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTCG TCGTTTTGGG CAGTGGCGTC GTCGGGGTGA CGAGTGCGTA TTACCTGGCG
CGCGCCGGTC ACGAAGTGAC GGTTATCGAT CGCGAGGCCG GCCCGGCGCT CGAAACCAGT
TTCGCCAATG CCGGCCAGAT CTCGCCGGGC TACGCATCGC CGTGGGCCGC GCCGGGTGTG
CCGCTGAAGG CCGTCAAGTG GATGTTCCAG AAACACGCGC CGCTGGCCAT CCGCCTCGAC
GGAACGCAAT TCCAGTTGCA ATGGATGTGG CAGATGCTGC AAAACTGCAC GTCGTCGCGC
TATGCGGTGA ACAAAGGCCG CATGGTCCGC CTCGCCGAAT ACAGCCGCGA CTGCCTGCAG
GCGCTGCGCG CTGAAACCGG CATCCAGTAC GAAGGCCGCA CGGGCGGCAC GCTGCAGGTG
TTCCGCACGC AGCAGCAATT CGAAGGCGCC GCGAAAGACA TCGCCGTGCT GCGGGAAGCC
AGTGTGCCGT ACGAACTGCT GTCGCCGGCT GAACTGGCGC AGGCGGAACC GGCGCTCGCC
GCCGTGTCGC ACAAGCTGAC CGGCGGTCTG CGCCTGCCGG GCGATGAAAC CGGCGACTGC
CAGATGTTCA CCACGCGCCT CGCCGCGCTG GCCGAACAAC TGGGCGTCAA ATTCCGCTAC
AACACGCCGA TCGACGCACT CGCAATGGCC GGCGACCGCA TCGCCGGCGT GAAGTGCGGC
GAAGAACTCG TGCGCGCCGA TTCGTTCGTC GTCGCGCTCG GTTCGTACTC CACCCAATTC
CTGTCTGGCC TCGTAAAGAT CCCGGTGTAT CCGCTCAAGG GTTATTCGAT CACGGCGCCA
ATCGTCAACG AAGCATCGGC ACCAGTGTCT ACCGTGCTCG ACGAAACCTA CAAGATCGCG
ATCACGCGTT TCGACGACCG GATTCGCGTG GGCGGCATGG CCGAGATTGT CGGCTTCGAC
AAATCGCTGC GCGAGGCGCG CCGTGAAACG CTGGAACTGT GCGTGAACGA TCTGTTCCCG
GGCGGCGGCG ACACGTCGAA GGCCACGTTC TGGTCCGGTC TGCGCCCCAT GACGCCGGAC
GGCACGCCGA TCGTCGGCCG CACGCCGGTG GCCAACCTGT TCCTGAACAC GGGCCACGGC
ACGCTGGGCT GGACGATGTC GTGCGGCTCG GGCCAACTGC TCGCCGACGT GATGTCGGGC
AAGCAGCCGG CCATCAAGGC GGACGACCTG TCGGTGCATC GCTATCTCGG TGAGACGCGC
GGTGCGCATC GCCCGGCTTA TGCCGCCTGA
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| Protein sequence | MRVVVLGSGV VGVTSAYYLA RAGHEVTVID REAGPALETS FANAGQISPG YASPWAAPGV
PLKAVKWMFQ KHAPLAIRLD GTQFQLQWMW QMLQNCTSSR YAVNKGRMVR LAEYSRDCLQ
ALRAETGIQY EGRTGGTLQV FRTQQQFEGA AKDIAVLREA SVPYELLSPA ELAQAEPALA
AVSHKLTGGL RLPGDETGDC QMFTTRLAAL AEQLGVKFRY NTPIDALAMA GDRIAGVKCG
EELVRADSFV VALGSYSTQF LSGLVKIPVY PLKGYSITAP IVNEASAPVS TVLDETYKIA
ITRFDDRIRV GGMAEIVGFD KSLREARRET LELCVNDLFP GGGDTSKATF WSGLRPMTPD
GTPIVGRTPV ANLFLNTGHG TLGWTMSCGS GQLLADVMSG KQPAIKADDL SVHRYLGETR
GAHRPAYAA
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