| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0982 |
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| Symbol | rpsA |
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| ID | 4004010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 3800381 |
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| End bp | 3802096 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637948655 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_560017 |
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| Protein GI | 161621315 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.144535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC TGCAAACCTC TACCCCGAAT ACCGAATCTT TTGCGGCTCT GTTCGAAGAG
TCGCTGACCA AGCAAGACAT GCGCGCCGGC GAAGTGATCT CCGCCGAAGT CGTGCGTGTT
GACCACAACT TCGTGGTCGT CAACGCTGGT CTCAAGTCCG AAGCCTACAT CCCGCTCGAA
GAGTTCCTGA ACGACGCGGG CGAGGTAGAA GTGCAGGCGG GCGACTTCGT TTCCGTCGCG
ATCGACGCGC TGGAAAACGG CTATGGCGAC ACGATCCTGT CGCGCGACAA GGCGAAGCGC
CTCGCTTCGT GGCTGTCGCT GGAAAAGGCT CTCGACAACA ACGAACTCGT GACCGGCACG
ATCACGGGCA AGGTCAAGGG CGGCATGACC GTCATGGTCA ACGGCATCCG CGCGTTCCTG
CCGGGTTCGC TGGTCGACAC GCGTCCGGTC AAGGACACGA CCCCGTACGA AGGCAAGACG
CTGGAATTCC GCGTCATCAA GCTCGACCGC AAACGTAACA ACGTCGTGCT GTCGCGCCGT
GCCGTGATCG AAGCGACCCA AGGCGAAGAG CGCGCAAAGC TGCTCGAAAC GCTGAAGGAA
GGCGCGATCG TGGAAGGCGT GGTGAAGAAC ATCACCGATT ACGGCGCGTT CGTGGACCTC
GGCGGTATCG ACGGCCTGCT GCACATCACC GATATCGCAT GGCGTCGTGT GCGTCACCCG
AGCGAAGTGC TGTCGGTTGG CCAGGAAGTC ACCGCTAAGA TCCTCAAGTT CGATCAAGAA
AAGAACCGCG TTTCGCTGGG CATCAAGCAA CTGGGCGACG ATCCGTGGGA AGGTATCTCG
CGCCGTTACC CGTCGGGCAC GCGCCTGTTC GGTAAGGTCA CCAACATCAC CGACTACGGC
GCATTCGTCG AAGTCGAATC GGGCATCGAA GGCCTGGTTC ACGTGTCGGA AATGGACTGG
ACGAACAAGA ACGTTGCACC GTCGAAGGTT GTGCAACTGG GCGACGAAGT CGAAGTCATG
GTTCTCGAAA TCGACGAAGA CCGCCGCCGT ATCAGCCTCG GCATGAAGCA ATGCAAGCCG
AACCCCTGGG ACGACTTCAG CCGCAACTTC AAGAAGGGCG ACAAGCTGCA AGGCGCAATC
AAGTCGATCA CCGACTTCGG CGTCTTCATT GGTCTGCCGG GCGGTATCGA CGGTCTGGTT
CACCTGTCGG ACCTGTCGTG GTCGGAAACG GGCGAAGAAG CGGTTCGCAA GTACAAGAAG
GGCGACGAAG TGGAAGCGAT CGTTCTCGGC ATCGACGTCG AGAAGGAACG CATTTCGCTG
GGCATCAAGC AGCTCGAAGG CGACCCGTTC AGCAACTTCG TTGCCATGAA CGACAAGGGT
TCGATCGTCG ACGGCGTGGT CAAGACGGTG GACGCGAAGG GCGCCGTGGT TCAGCTGTCG
GCTGAAGTCG AAGGCTACCT GCGCGCTTCG GAAATCGCAC AAGACCGCGT GGAAGACGCT
CGCAACGTGC TGAAGGACGG CGACAAGGTC AATGCGATGA TCATCAACAT CGATCGCAAG
TCGCGCGGTA TCAACCTGTC GATCAAGGCC AAGGATTCGG CTGAGCAACA GGAAGCGATC
CGCGGCCTGG CTTCGTCGGA CTCGAGCTCG GCTGCCACCG GCACGACGAA CCTCGGCGCG
CTGCTGAAGG CCAAGCTCGA CGGCCAGAAC CAGTAA
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| Protein sequence | MSDLQTSTPN TESFAALFEE SLTKQDMRAG EVISAEVVRV DHNFVVVNAG LKSEAYIPLE
EFLNDAGEVE VQAGDFVSVA IDALENGYGD TILSRDKAKR LASWLSLEKA LDNNELVTGT
ITGKVKGGMT VMVNGIRAFL PGSLVDTRPV KDTTPYEGKT LEFRVIKLDR KRNNVVLSRR
AVIEATQGEE RAKLLETLKE GAIVEGVVKN ITDYGAFVDL GGIDGLLHIT DIAWRRVRHP
SEVLSVGQEV TAKILKFDQE KNRVSLGIKQ LGDDPWEGIS RRYPSGTRLF GKVTNITDYG
AFVEVESGIE GLVHVSEMDW TNKNVAPSKV VQLGDEVEVM VLEIDEDRRR ISLGMKQCKP
NPWDDFSRNF KKGDKLQGAI KSITDFGVFI GLPGGIDGLV HLSDLSWSET GEEAVRKYKK
GDEVEAIVLG IDVEKERISL GIKQLEGDPF SNFVAMNDKG SIVDGVVKTV DAKGAVVQLS
AEVEGYLRAS EIAQDRVEDA RNVLKDGDKV NAMIINIDRK SRGINLSIKA KDSAEQQEAI
RGLASSDSSS AATGTTNLGA LLKAKLDGQN Q
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