| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0965 |
|---|
| Symbol | fdhB |
|---|
| ID | 4003049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 3818472 |
|---|
| End bp | 3820037 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637948671 |
|---|
| Product | NAD-dependent formate dehydrogenase, beta subunit |
|---|
| Protein accession | YP_560033 |
|---|
| Protein GI | 91784827 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.162501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCA TCTATGTTCC CCGCGATTCG TCGGCACTGG CGCTCGGCGC TGACGCGCTC
GCTCAGGCGA TCGAAGCCGA AGCCGCGCGC CGCGGCCTCG CTGTCGAACT CGTTCGAAAC
GGCTCGCGCG GTTTGTTATG GCTTGAACCG CTCGTTGAAG TTCAGACGCG TGAAGGCCGC
ATCGGCTACG CGAATGTCGA AGCGAGCGAC GTCGCCGCGC TGTTCGATGC CGGCTTACCT
GAAGGCGGGG CGCACCCGAA GCGCGTCGGC GTGGTCGACG AGATTCCGTA TCTGAAGAAG
CAGCAGCGCC TGACGTTCGC GCGCATCGGC ATCACGGACC CGCTTTCCAT CGACGACTAC
ATCGCCCACG GCGGCCTCGA AGGCTTGCGC CAGGCTCTGC AAACCGACGG CGACGCCGCC
TGCGAAGCGC TGATCGAATC CGGCCTGCGC GGCCGGGGCG GCGCGGCCTT CCCCGCCGGC
ATCAAATGGC GCACGGTGCG CGGCGCGAAG GCGGCGCAGA AGTACATCGT CTGCAATGCG
GACGAAGGCG ATTCCGGCAC CTTCTCCGAT CGTCTCGTGA TGGAAAGCGA TCCGTACGTG
CTGATCGAAG GGATGATCAT CGCGGGCGTC GTGACGGGCG CGACGGTGGG CCACATCTAC
GTGCGCAGCG AGTATCCCCA TTCGATCGCG ACGCTCGAAG CGGCCATCGC GAAAGCACGC
GCTGCCGGCT GGCTCGGCGA TAGCGTGCTC GGCTCGACGG AACACCGCTT CGAACTGTTC
GTGGCGAAAG GCGCCGGCGC ATATGTGTGC GGCGAGGAAA CGGCGCTGCT CGAATCGCTC
GAAGGCAAGC GCGGCATTGT GCGCGCCAAG CCGCCGGTGC CGGCGCTCGT CGGCCTGTTC
GGCCAGCCGA CCGTGATCAA CAACGTCATC ACGCTGGCAA CGGTGCCGAT CATTTTCGCG
CGCGGCGCGG CGTTCTACAA AGACTTCGGC ATGGGCCGCT CGCGCGGCAC GCTGCCGTTC
CAGCTGGCGG GCAATGTGAA GCAAGGCGGC CTGGTCGAAC TCGCGTTCGG CGTGACGCTG
CGCGAATTGC TCTACGAGTA CGGCGGCGGC ACGGCGAGCG GCCGCCCCGC GCGCGCGGTG
CAGGTGGGCG GCCCGCTCGG CACGTATCTG CCGGAAAGCC AGTGGGACAT TCCGATGGAC
TACGAGGCGT ATGCGGCAGT CGGCGCGGTA GTGGGTCACG GCGGCCTCGT GGTCCATGAC
GACACGTCGA ATCTCGCCGA ACTCGCGCAA TACGCCATGC ACTTTTGCGC GCTCGAATCA
TGCGGCAAAT GCACGCCGTG CCGGATCGGC TCGACGCGCG GCGTCGAAGT GATCGGGCGG
ATTCGCAACG GCGATACGTC CACCCGGCAA GTGCAATTGC TGCGCGATCT GTGCGACACG
ATGGTGTCCG GGTCGCTCTG CGCGATGGGC GGCATGACGC CGTTCCCGGT GCTGTCCGCG
CTCGATCATT TCCCCGAAGA CTTCGGTCTC GCCAACGTGT CTGAACACGC GCCGAAAGCG
GCCTGA
|
|---|
| Protein sequence | MTRIYVPRDS SALALGADAL AQAIEAEAAR RGLAVELVRN GSRGLLWLEP LVEVQTREGR
IGYANVEASD VAALFDAGLP EGGAHPKRVG VVDEIPYLKK QQRLTFARIG ITDPLSIDDY
IAHGGLEGLR QALQTDGDAA CEALIESGLR GRGGAAFPAG IKWRTVRGAK AAQKYIVCNA
DEGDSGTFSD RLVMESDPYV LIEGMIIAGV VTGATVGHIY VRSEYPHSIA TLEAAIAKAR
AAGWLGDSVL GSTEHRFELF VAKGAGAYVC GEETALLESL EGKRGIVRAK PPVPALVGLF
GQPTVINNVI TLATVPIIFA RGAAFYKDFG MGRSRGTLPF QLAGNVKQGG LVELAFGVTL
RELLYEYGGG TASGRPARAV QVGGPLGTYL PESQWDIPMD YEAYAAVGAV VGHGGLVVHD
DTSNLAELAQ YAMHFCALES CGKCTPCRIG STRGVEVIGR IRNGDTSTRQ VQLLRDLCDT
MVSGSLCAMG GMTPFPVLSA LDHFPEDFGL ANVSEHAPKA A
|
|---|
| |