| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0964 |
|---|
| Symbol | fdhA |
|---|
| ID | 4003050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 3820052 |
|---|
| End bp | 3823000 |
|---|
| Gene Length | 2949 bp |
|---|
| Protein Length | 982 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637948672 |
|---|
| Product | NAD-dependent formate dehydrogenase, alpha subunit |
|---|
| Protein accession | YP_560034 |
|---|
| Protein GI | 91784828 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.133867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACA TGCTCAACTC ATCCACTGGC GGCTGCGGCT CCGGCAACTG CGCGTGCAAG
GCGCAAGCCC AGCAGCAGCG CTCGCCCCGT TCCTTCTTCG ACGACACGGA CTACGGCACG
CCCGAGCGTC ACGCCGACAT CGACGTCACG CTGGAAATCG ACGGCCAGTC CGTCACCGTG
CCGGCCGGCA CCTCCGTCAT GCGCGCCGCC GTCGAAGCGG GCGTCAACGT GCCGAAGCTC
TGCGCGACCG ATTCGCTGGA ACCGTTCGGC TCGTGCCGCC TGTGTCTCGT GGAAATCGAA
GGCAAGCGCG GCTATCCCGC GTCATGCACG ACGCCGGTCG AAGCCGGCAT GAAGGTGCGC
ACGCAGACCG ATCGTCTGCA GTCGCTGCGC CGCAACGTGA TGGAGCTGTA CATCTCCGAT
CACCCGCTCG ACTGCCTGAC CTGCCCCGCC AACGGCGACT GCGAACTGCA GGACATGGCG
GGCGTCACGG GCTTGCGCGA AGTGCGCTAC GGCTTCGACG GCGCGAATCA CCTGAAGGAT
AAGAAAGACG AGTCGAACCC GTACTTCACC TACGACGCGT CGAAGTGCAT CGTCTGCAAT
CGCTGCGTGC GCGCGTGCGA GGAAACGCAA GGTACGTTCG CGCTGACCAT CGCCGGGCGC
GGTTTCGAAT CGCGCGTGGC GGCCAGCGAA AACGTGCCGT TCATGGAATC GGAGTGCGTG
TCGTGCGGCG CGTGCGTGGC CGCATGCCCG ACCGCGACCT TGCAGGAAAA GACCGTCATC
ATGCTTGGCC AGGCCGAGCA TTCGGTCGTG ACCACGTGCG CGTATTGCGG CGTCGGCTGC
TCGTTCAAGG CGGAGATGAA GGGCAACCAG GTCGTGCGGA TGGTGCCGCA CAAGAACGGC
CAGGCCAACG AAGGCCACGC CTGCGTGAAG GGCCGCTTTG CGTGGGGCTA CGCGACGCAC
AAGGACCGCA TCACCAGGCC GATGATCCGT GCAAAGATCA CCGATCCGTG GCGCGAAGTG
AGTTGGGAAG AAGCGCTCAC GTATGCAGCG TCGGAATTCC GCCGCATTCA GGCGAAGCAC
GGGCGCGATT CGATCGGCGG CATTACGTCG TCGCGTTGCA CGAACGAAGA AACGTATCTG
GTGCAAAAGC TCGTGCGCGC CGCGTTCGGC AACAACAACG TCGACACCTG CGCGCGCGTG
TGCCACTCGC CGACCGGCTA TGGACTGAAG ACCACGCTCG GCGAATCGGC GGGCACGCAG
ACGTTCGCCT CGGTCGATAA AGCCGACGTG ATCATGGTGA TCGGCGCGAA TCCGACCGAC
GGCCACCCGG TGTTCGGCTC ACGTCTGAAA CGCCGCGTGC GCGAAGGCGC GAAGCTGATC
GTGGTCGATC CGCGCCGCAT CGATATCGTC GATACGCCGC ATGTGAAGGC GTCGCATCAT
CTGCAATTGC GCCCGGGCAC CAACGTGGCA GTGGTAAACG CGCTGGCGCA TGTGATCGTC
ACCGAAGGGC TGGTGAACGA AGCGTTCGTT GCCGAGCGTT GCGAAACGCG CGCGTTCGAG
CAATGGCGCG ATTTCGTCGC GCTGCCGGAA AACGCGCCGG AGGCGACCGA GGCGGCGACC
GGCGTGCCGG CTCAAGCCGT GCGCGAAGCC GCCCGCATCT ATGCGACCGG CGGCAACGCC
GCGATCTACT ACGGTCTGGG CGTCACCGAA CACGCGCAAG GCTCGACGAT GGTGATGGGC
ATCGCCAACC TCGCAATGGC GACGGGCAAC ATCGGCCGCG AAGGTGTGGG CGTGAATCCG
CTGCGCGGCC AGAACAACGT GCAGGGTTCG TGCGACATGG GCTCGTTCCC GCACGAGCTG
CCAGGCTATC GCCACATCAG CGACACGGTC ACGCGCACGC TGTTCGAGGA AGCGTGGAAC
GTCACGCTGC AACCCGAACC CGGTCTGCGC ATTCCGAACA TGTTCGACGC CGCCGTGCAC
GGCACCTTCA AGGGTCTGTA CTGCCAGGGC GAAGACATCG TGCAGTCGGA TCCGAATACG
CACCACGTGT CCGCGGCGCT GTCGGCGATG GAATGCATTG TCGTGCAGGA CATTTTCCTG
AACGAGACCG CCAAGTATGC GCACGTGCTG CTGCCTGGTT CGTCGTTCCT CGAAAAGGAC
GGCACGTTCA CCAACGCGGA GCGCCGCATC TCGCGCGTGC GCAAGGTCAT GCCGCCGGTA
CCGGGTTACG CCGACTGGGA AGTCACGGTG CTGCTCGCGC GCGCGCTCGG CTATGAAATG
GACTACACGC ATCCGTCGCA GATCATGGAC GAGATCGCGC GTCTCACGCC GACCTTCCAC
GGCGTCTCGT ACAAAAAGCT CGACGAACTC GGCAGCATCC AGTGGCCGTG CAACGAGAAT
GCGCCGGACG GTACGCCGAC CATGCATATC GACACCTTCG TGCGCGGCAA GGGCAAGTTC
GTGATCACGA AGTTCATCGC GACGCCGGAG AAAGTCACGC GCAAATTCCC GCTGCTGCTC
ACCACGGGCC GCATCCTGTC GCAATACAAC GTGGGCGCGC AGACGCGCCG CACCGAGAAC
TCGCGCTGGC ACGACGAGGA CCGGCTGGAA ATCCATCCGC ACGACGCCGA AGAACGCGGC
ATCAGGACGG ACGATTGGGT CGGCATTGAA TCGCGCGCGG GACAGACCGT GCTGCGCGCC
AAGGTGACCG AGCGCATGCA GCCGGGCGTC GTTTATACGA CGTTCCACTT CCCCGAATCG
GGCGCGAACG TGATCACCAC CGATAGCTCG GACTGGGCGA CCAACTGTCC GGAATACAAG
GTGACCGCGG TGCAGGTGAT GCCGGTCGAA CAGCCGTCGC AATGGCAGAG AGACTATTCG
CGTTTCAACA CCGAACAGCT CGATCTGCTG AAGCAGCGCG AGCTGGCCAA CGCAACATCG
GGCAAGTGA
|
|---|
| Protein sequence | MSDMLNSSTG GCGSGNCACK AQAQQQRSPR SFFDDTDYGT PERHADIDVT LEIDGQSVTV
PAGTSVMRAA VEAGVNVPKL CATDSLEPFG SCRLCLVEIE GKRGYPASCT TPVEAGMKVR
TQTDRLQSLR RNVMELYISD HPLDCLTCPA NGDCELQDMA GVTGLREVRY GFDGANHLKD
KKDESNPYFT YDASKCIVCN RCVRACEETQ GTFALTIAGR GFESRVAASE NVPFMESECV
SCGACVAACP TATLQEKTVI MLGQAEHSVV TTCAYCGVGC SFKAEMKGNQ VVRMVPHKNG
QANEGHACVK GRFAWGYATH KDRITRPMIR AKITDPWREV SWEEALTYAA SEFRRIQAKH
GRDSIGGITS SRCTNEETYL VQKLVRAAFG NNNVDTCARV CHSPTGYGLK TTLGESAGTQ
TFASVDKADV IMVIGANPTD GHPVFGSRLK RRVREGAKLI VVDPRRIDIV DTPHVKASHH
LQLRPGTNVA VVNALAHVIV TEGLVNEAFV AERCETRAFE QWRDFVALPE NAPEATEAAT
GVPAQAVREA ARIYATGGNA AIYYGLGVTE HAQGSTMVMG IANLAMATGN IGREGVGVNP
LRGQNNVQGS CDMGSFPHEL PGYRHISDTV TRTLFEEAWN VTLQPEPGLR IPNMFDAAVH
GTFKGLYCQG EDIVQSDPNT HHVSAALSAM ECIVVQDIFL NETAKYAHVL LPGSSFLEKD
GTFTNAERRI SRVRKVMPPV PGYADWEVTV LLARALGYEM DYTHPSQIMD EIARLTPTFH
GVSYKKLDEL GSIQWPCNEN APDGTPTMHI DTFVRGKGKF VITKFIATPE KVTRKFPLLL
TTGRILSQYN VGAQTRRTEN SRWHDEDRLE IHPHDAEERG IRTDDWVGIE SRAGQTVLRA
KVTERMQPGV VYTTFHFPES GANVITTDSS DWATNCPEYK VTAVQVMPVE QPSQWQRDYS
RFNTEQLDLL KQRELANATS GK
|
|---|
| |