| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0923 |
|---|
| Symbol | pepN |
|---|
| ID | 4002899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 3869690 |
|---|
| End bp | 3872386 |
|---|
| Gene Length | 2697 bp |
|---|
| Protein Length | 898 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637948713 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_560075 |
|---|
| Protein GI | 91784869 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATA CCGCAACGCC CAATGTGATT CGCCGCGCCG ACTACGCGCC GCCCGCCTTC
CTGATCGACA CCGTCGCGCT GGAGTTCGAT CTGGTTCCTG AACGCACGGT GGTCCGCAAC
ACGATGCGCG TGCGCCGCAA TCCGGAAGCC GCGCGCGCCG CGCATCTGGA ACTGATGGGC
GAACAGCTGG AGTTCGTCAG CGCCGCGATC GACGGCAAGC CGTTCGCCAA TGCTCATGCG
CACGACCACG GCCTGCTGCT CGACAACGTG CCGGACCAGT TCGAACTGAC GCTCACGAGC
ATCTGCAATC CGGCTGCGAA CACCACGCTG TCGGGCCTGT ACGTGTCGGG CGGCAACTTC
TTCACGCAGT GCGAGGCCGA GGGCTTTCGC CGTATCACTT ACTTCCTCGA CCGCCCGGAC
GTGATGGCGA CCTTCACGGT CACGCTGCGC GCCAGCAAGG CCGATTATCC GGTGCTGCTG
TCGAACGGCA ATCTGCTCGA AGAAGGCGAT TTGCCGGACG GCCGCCACTT CGCGCGCTGG
GAAGATCCGT TCCGCAAGCC GAGCTACCTG TTCGCGCTGG TCGCCGGCAA GCTGGTCGCG
CTGGAAGAAC GCGTGAAGAG CGGCTCGGGC AAGGAAAAGC TGCTGCAGGT GTGGGTCGAG
CCGCACGATC TGGACAAGAC CCGTCACGCA ATGGATTCGC TGATCCATTC GATCCGCTGG
GACGAGGAAC GCTTCGGGCT CGAACTCGAT CTGGACCGCT TCATGATCGT CGCGGTGAGC
GACTTCAACA TGGGCGCGAT GGAGAACAAG GGGCTCAACA TCTTCAACAC GAAGTACGTG
CTGGCGAATC CCGAAACGGC AACGGACACC GACTTCGCGA ACATCGAGGC CGTGGTCGGC
CACGAATATT TCCACAACTG GACCGGCAAT CGCGTGACGT GCCGCGACTG GTTCCAGTTG
AGCCTGAAAG AAGGCCTGAC GGTATTCCGC GACCAGGAGT TCTCGGCCGA CATGGCCGGC
GGCGCGACTG ACGAAGCCGC GCGCGCCACC AAGCGCATCG AGGACGTGCG CGTGCTGCGC
CAGATGCAGT TCGCCGAAGA CGCGGGGCCG ATGGCGCACC CGGTGCGCCC GGAAAGCTAC
GTCGAGATCA ACAACTTCTA CACGATGACC GTCTACGAGA AAGGCTCGGA AGTCGTGCGG
ATGTATCAGA CGCTGTTCGG CCGCGACGGC TTCCGCAAGG GCATGGACCT GTACTTCAGG
CGCCACGACG GCCAGGCCGT GACCTGCGAC GATTTCCGTC ACGCGCTCGC CGACGCGAAC
GGCCGCGATC TCGCGCAGTT CGAGCGCTGG TATAGCCAGG CCGGCACGCC GCGGGTGTCC
GTGCGCACGC AATACGACGC CGCGCAGCAA CGCTACAGCG TGACGCTCAC GCAAGGCTAC
GGCGAAGCCG CGCCGGCCGC GCGCGAAACG CAGAAGGGTC CACTGCTGAT TCCGTTCGCG
ATCGGTTTGA TCGGCAAGGA CGGCCGTGAC CTGCCGCTGC AACTGGAAGG CGAAGCGCAG
GCCGGCAAGG CGACCACGCG CGTGCTCGAA TTCACGCAGA CCGAACAGAC CTTCACATTC
GTCAACGTGG CGCAGGAACC GCTGCCTTCG CTGCTGCGCA ATTTTTCGGC GCCGGTGATC
GTCGAATACG ACTACTCGGC GCAACAGCTG GCATTCCTGC TTGCCCACGA CAGCGACCCG
TTCAACCGCT GGGAAGCCGG CCAGCGGCTC GCCACGCGCG AACTGCTCAC GCTCGCCGGG
CGCGCCGCCA CGGGTGTGCC GCTGCAACTC GACGATTCCG TGGTCGCCGC GTTCGCACGC
GTGCTGACCG ACGAAACGCT CTCGCCTGCG TTCCGCGAAC TCGCGTTGAT GTTACCTTCG
GAAGCGTATC TGGCCGAGCA GATGGCCGAA TCGAATCCGG CGGCCGTGCA CGCCGCGCGG
CAGTTCGTGC GCAAGCGTCT TGCCAATGCG CTCAGAAGCG ACTGGCTCAA CGTGTACGAG
CAGCATCGCA CGCCGGGGGC GTACGAGGCC ACGCCTGAAG CGTCCGGTCA TCGCGCGCTG
AAGAATCTCG CGCTGTCGTA TCTCGCCGAA CTGGACGATC CAGCAGAGGC CGTGCGTCTC
GCGTCCGCGC AATACGATGC GGCGAACAAC ATGACCGACC GCTCGGCGGC ACTGTCCGTG
CTGCTCAATG CGTCGGCGGC CAACGGCGGC AGCGCCGAGG CGCAGCAGGC GCTGGACGAC
TTCTACCGGC GCTTCGAAAA GGAACCGCTC GTGATCGACA AGTGGTTTGC CTTGCAGGCC
ACGCAGCGCG GCAGCGCGCA ACGTCCGGTG ATCGACGTCG TGCGCAGGCT GATGACTCAC
CCGGCTTTCA ACCTGAAGAA CCCGAATCGC GCGCGCTCGC TGATTTTCAG CTTCTGCGCG
GCGAACCCGG CGCAGTTCCA TGCCGAAGAC GGCTCGGGCT ATGCGTTCTG GGCCGATCAG
GTGATCGCGC TCGACGCCAT CAATCCGCAA GTGGCCGCCC GCCTCGCCCG CTCGCTGGAA
TTGTGGCGCC GCTTCACGCC GGCGCTGCGC GACGGCATGC GCGCGGCACT GGAGAAAGTG
GCCGCGCAGG TCAAATCGCG CGACGTGCGC GAGATCGTGG AGAAAGCGTT GGCGTGA
|
|---|
| Protein sequence | MADTATPNVI RRADYAPPAF LIDTVALEFD LVPERTVVRN TMRVRRNPEA ARAAHLELMG
EQLEFVSAAI DGKPFANAHA HDHGLLLDNV PDQFELTLTS ICNPAANTTL SGLYVSGGNF
FTQCEAEGFR RITYFLDRPD VMATFTVTLR ASKADYPVLL SNGNLLEEGD LPDGRHFARW
EDPFRKPSYL FALVAGKLVA LEERVKSGSG KEKLLQVWVE PHDLDKTRHA MDSLIHSIRW
DEERFGLELD LDRFMIVAVS DFNMGAMENK GLNIFNTKYV LANPETATDT DFANIEAVVG
HEYFHNWTGN RVTCRDWFQL SLKEGLTVFR DQEFSADMAG GATDEAARAT KRIEDVRVLR
QMQFAEDAGP MAHPVRPESY VEINNFYTMT VYEKGSEVVR MYQTLFGRDG FRKGMDLYFR
RHDGQAVTCD DFRHALADAN GRDLAQFERW YSQAGTPRVS VRTQYDAAQQ RYSVTLTQGY
GEAAPAARET QKGPLLIPFA IGLIGKDGRD LPLQLEGEAQ AGKATTRVLE FTQTEQTFTF
VNVAQEPLPS LLRNFSAPVI VEYDYSAQQL AFLLAHDSDP FNRWEAGQRL ATRELLTLAG
RAATGVPLQL DDSVVAAFAR VLTDETLSPA FRELALMLPS EAYLAEQMAE SNPAAVHAAR
QFVRKRLANA LRSDWLNVYE QHRTPGAYEA TPEASGHRAL KNLALSYLAE LDDPAEAVRL
ASAQYDAANN MTDRSAALSV LLNASAANGG SAEAQQALDD FYRRFEKEPL VIDKWFALQA
TQRGSAQRPV IDVVRRLMTH PAFNLKNPNR ARSLIFSFCA ANPAQFHAED GSGYAFWADQ
VIALDAINPQ VAARLARSLE LWRRFTPALR DGMRAALEKV AAQVKSRDVR EIVEKALA
|
|---|
| |