| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0895 |
|---|
| Symbol | |
|---|
| ID | 4002838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 3897498 |
|---|
| End bp | 3898667 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637948744 |
|---|
| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase |
|---|
| Protein accession | YP_560102 |
|---|
| Protein GI | 91784896 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
|---|
| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.547701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCGC AAACCGATTT CGTCCATATG GAACGCGCGC TCGCGTTGGC CAGGCGCGGC
ATGTATACCA CCGACCCGAA TCCCCGGGTC GGCTGCGTAC TCGTCAAGAA TGGCGCGGTG
ATCGGCGAAG GCTTCACTCA GCCGGCCGGT CAGGATCACG CCGAGATCCG CGCCTTGAAA
GATGCGCGCT CGCGCGGCCA TGATCTGCGC GGCGCCACCG CCTACGTGAC GCTGGAGCCA
TGCAGCCACT TCGGCCGCAC GCCGCCGTGC GTCAACGCGC TCATCGAAGC CCAGGTCGCG
CTCGTGGTCG CGGCGATGGA AGATCCCAAT CCGCTCGTGT CCGGACGCGG TCTCGCCATA
CTGCGTGACG CGGGCATCGA GGTGCGCTGC GGACTGCTCG CCAACGAAGC GCACGAACTC
AATATCGGCT TCGTCTCGCG CATGACCCGC GGCCGCCCGT GGGTACGCAT GAAAGTCGCG
GCCTCGCTGG ATGGCCGCAC CGGCTTGCCT TCAGGCGTCA GCCAATGGAT TACCGGTGAA
GCGGCGCGCG CCGACGGCCA CGCCTGGCGC GCGCGCGCGT CGGCGATCCT GACCGGTATC
GGCACCGTCA GGGAAGACGA TCCGCGCATG ACGGTGCGCG CCGTCGACAC GCCGCGCCAG
CCGCAACGCG TGCTGATCGA CAGCCAGCTC GACGTGCCCC CGGAGGCGCA GATTCTGGCC
GGCGCGCCCA CGTTGATCTT CTGCGGCAAT CTCGATCAGC GCCATACCGA TCGCGCCAAT
GCGTTGCGCG ATCGCGGCGC CGAGATCGTC CAACTGGCGA ACCCGGCCGG CAAGGTCGAT
CTGCCCGCGG TACTGAAAGT GCTCGGCGAG CGCAACGTGA ACGAACTGCA TGTCGAGGCA
GGCTACAAGC TGAATGGCTC GCTGCTGCGC GAAGGCTGTG TCGACGAACT GCTCGTGTAT
CTCGCGCCAA GCCTGCTCGG CATGGATTCG ATGAGCATGT TCAGTCTGAC CACCCCTGAG
ACGCTCGATG ATCGCGTGAA ACTGCACTTC CACGCAGTGG ACCGGATCGG CGACGATCTG
CGGATTCTCG CGCGCTTTAT GGCGCCGCCC GCGCCTCAGG CCATCCCCGA ACCCGGCGGC
GAGCCCGCGC CCCAACCCGT TTCGAATTGA
|
|---|
| Protein sequence | MFSQTDFVHM ERALALARRG MYTTDPNPRV GCVLVKNGAV IGEGFTQPAG QDHAEIRALK
DARSRGHDLR GATAYVTLEP CSHFGRTPPC VNALIEAQVA LVVAAMEDPN PLVSGRGLAI
LRDAGIEVRC GLLANEAHEL NIGFVSRMTR GRPWVRMKVA ASLDGRTGLP SGVSQWITGE
AARADGHAWR ARASAILTGI GTVREDDPRM TVRAVDTPRQ PQRVLIDSQL DVPPEAQILA
GAPTLIFCGN LDQRHTDRAN ALRDRGAEIV QLANPAGKVD LPAVLKVLGE RNVNELHVEA
GYKLNGSLLR EGCVDELLVY LAPSLLGMDS MSMFSLTTPE TLDDRVKLHF HAVDRIGDDL
RILARFMAPP APQAIPEPGG EPAPQPVSN
|
|---|
| |