| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0821 |
|---|
| Symbol | |
|---|
| ID | 4003222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 3969679 |
|---|
| End bp | 3970878 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637948809 |
|---|
| Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_560165 |
|---|
| Protein GI | 91784959 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTCA AGTTTGCTTA CGCCGTGTCC ATCGCGGCCG CGGTTGCGAT GCTGACCGCG
TGCGGCAAGA AACAGGATGG CGAGGCGGGA GCGGGTGCAT CCGCGGCTGT GGCCGCAGCG
GCACCGGCGA GTGAAGCGAC TATCGTGAAG ATCGGTCATG CGGCCCCTTT GACGGGCGGC
ATAGCGCATC TGGGCAAGGA CAACGAAAAC GGCGCGCGTC TGGCGGTCGA GGAAATCAAT
ACGCAGGGTT TGACCATCGA CGGTCACAAG ATCCAGTTGG AGCTGGATGC GCAAGACGAC
GCAGCGGACC CGAAAACGGG CACGGCGGTC GCGCAGAAGC TGGTCGACGA TCATGTGGTG
GCGGTGGTGG GGCACCTGAA TTCGGGCGTG TCGATTCCGG CTTCGAAGAT CTATAGCGAT
GCGAGCATCG TGCAGATCTC GCCGTCGTCG ACGAATCCGG CGTACACGCT GCAGGGTTTC
AAGACGACCT ACCGGGTCGT CGCCACCGAC GCGCAACAAG GTCCGGCGCT CGCCGATTAC
GCCACGAAGG CGTTGGGCGC CAAACGCATC GCCATAGTGG ACGATGCAAC CGCCTACGGT
AAGGGGCTCG CGGACGAATT CGCGAAGACC GTACAGGCGA GCGGAGCGAA GATCGTCGCG
CGGGAAGCGA CGAACGACAG GGCCACGGAT TTCCGGGCCA TCCTCACGAA GATCAAGAGT
GTTCAGCCGG ACGTGATCAT GTTCGGCGGC ATGGACGCGA CGGGCGGGCC GTTTACCAAA
CAGGCGGCGG CGCTCGGTAT CAGGGCAAAA ATCCTTGGCG GCGACGGTGT GTGTACCGAC
AAGGTGGGTG AGCTGGCAGG AACCGCCGTG CAAAACCTGG TCTGTTCGGA GGCGGGACTC
GCGCTTTCGA AAATGGACAA GGGAGCGGAC TTCGAAAAGA AGTACGTGGA CCGCTTCCAC
ACACCGGTGC AGATTTACGC GCCGTTCACG TATGACGCTG TGTACGTGAT TGTCGATGCA
ATGAAGCGCG CTAATTCGAT CGAGGCGCCC AAGGTGCTGG CTGCGATGCC GTCGACCGAT
TACAACGGGG TAATCGGTCA CATCGCGTTC GACGACAAGG GTGATTTGAA AGAGGGCGCC
ATTACGCTTT ACGACTTCAA GGACGGCAAG AAAGCGGTCC TCGACGTCGT AAAGATGTGA
|
|---|
| Protein sequence | MRVKFAYAVS IAAAVAMLTA CGKKQDGEAG AGASAAVAAA APASEATIVK IGHAAPLTGG
IAHLGKDNEN GARLAVEEIN TQGLTIDGHK IQLELDAQDD AADPKTGTAV AQKLVDDHVV
AVVGHLNSGV SIPASKIYSD ASIVQISPSS TNPAYTLQGF KTTYRVVATD AQQGPALADY
ATKALGAKRI AIVDDATAYG KGLADEFAKT VQASGAKIVA REATNDRATD FRAILTKIKS
VQPDVIMFGG MDATGGPFTK QAAALGIRAK ILGGDGVCTD KVGELAGTAV QNLVCSEAGL
ALSKMDKGAD FEKKYVDRFH TPVQIYAPFT YDAVYVIVDA MKRANSIEAP KVLAAMPSTD
YNGVIGHIAF DDKGDLKEGA ITLYDFKDGK KAVLDVVKM
|
|---|
| |