| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0818 |
|---|
| Symbol | radC |
|---|
| ID | 4003225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 3973036 |
|---|
| End bp | 3973797 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637948812 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_560168 |
|---|
| Protein GI | 91784962 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.84629 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATC ACGCCACCCT GATTGACGAA GCAAACCTTG AAACCGCCGC CCCCGGTCCC
GCGGCACTGG AGACAGCGTC CGCGCCGCTG GTGCGCGGCA AATGGCTCAA AAACGACATG
CCGCGCGAGC GGCTGATCGA ACAGGGCGCC AGCGTGCTGT CGGATACCGA ACTGATCGTG
CTGATTCTTG GCTCGGGTCT GCCGGGCCAT GACGTCTTCG ATGTGGCGCG CACGTTGCTC
GACCGCTTCG GCTCGCTGCG CGCGATGCTC GACGCGACCT ACACGGATTT CGCCGACCTA
CGCGGCATTG GCCCCGCGAA AAAGACGCAA CTGCTCGCCA TTATGGAAAT GGCGCGGCGC
TCGCTAGTCG ATAAAATGCG CATGCGCTCG CTGATCAATT CGCCCGAGGC CGTGGAAAAT
TACCTTCGCC TGCGGATCGG CGGGCGTCCG CAGGAAATTT TCGTGTCGCT TTTCCTCGAC
GCCCGGCATC GGCTGATACG TTGCGAAGAA AGTGCACAGG GCACGCTCAC GCGCATGGCG
GTATATCCGC GCGAGATCGT GCGGCGCGCG CTGAGTCTGA ACGCGGCCAG TCTGATCGTC
GCGCACAATC ACCCGTCCGG CGCCGTCCAG CCGAGCGCGA GCGATTGCCG CTTGACTCAT
ACGCTGCGCG ACGCCCTCAC GCTGATCGAC GTGCAACTGG TCGATCACCT GGTGATCGGC
ACCGATAGCG TCTACTCCTT CGCCCGCGCC GGCTGGCCGT GA
|
|---|
| Protein sequence | MADHATLIDE ANLETAAPGP AALETASAPL VRGKWLKNDM PRERLIEQGA SVLSDTELIV
LILGSGLPGH DVFDVARTLL DRFGSLRAML DATYTDFADL RGIGPAKKTQ LLAIMEMARR
SLVDKMRMRS LINSPEAVEN YLRLRIGGRP QEIFVSLFLD ARHRLIRCEE SAQGTLTRMA
VYPREIVRRA LSLNAASLIV AHNHPSGAVQ PSASDCRLTH TLRDALTLID VQLVDHLVIG
TDSVYSFARA GWP
|
|---|
| |