| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0790 |
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| Symbol | |
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| ID | 4005601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 4005314 |
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| End bp | 4006978 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637948840 |
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| Product | ABC oligopeptide/dipeptide transporter, periplasmic ligand binding protein |
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| Protein accession | YP_560196 |
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| Protein GI | 91784990 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.245293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTC CCGCGAACCG GTTTCCCGCA CTCGGCGCAG CCCGCCTCAT CGCCGACGCC
TACGGCAACC ACGCCATCGA CGAATTCGTC GCCGGCCGCA TCACGCGCCG CGATCTGCTG
CGCTATGCAA GCGTGATCGG TTTGTCGCTG GCCGGCGCCA GCGTGCTGAA TGCGCCGCAA
GCGCGTGCGC AAGGCACCGC GGCCGCGTCG AATCAGACCA TCCGCGTGGC TCACCTGACA
CCGGCCGGCG CGGTCGATCC GCTCACCGTG ACGGACGCCG CCAGCCTCGC GCTGCTGAAC
CAGACCGGCG AATTCCTGAT CGACGACGAC GGCGAAAAGC TCGTGCTCAA GCCGGCACTC
GCGTTGTCGT GGAAACCGAA CGACAAAGGC GACGTGTGGA CCTTCAAGCT GCGTCCGAAC
GTCAAGTTTC ACGACGGCCA GCTGTTCAGC GCCAAAGACG TGGTCGCCAC CTTCGACCGC
CTCGCCGATC CGGCGAGCGG TTCGGCGGCA CTTTCCGTGC TCAAGGGCGT TCTTTCGAAA
GGCGGCGCCA GGGTGGTCGA CGACCACACG GTCGCGTTTC ATCTGGACGC GCCGAACGGC
AACTTCCCGT ATTACGTTTC CTCGGACAAT TACAACGCCG TGATCCTGCC CGCGAACTAC
GCGGGCGGTT ATGAAAAGAG CTTCATCGGC ACGGGTCCGT TCAAGCTCGA AAAGTATCAG
GCCAAGGTGG GCGCCTCGTT CGTACGCAAT CCCGACTACT GGGGCGAAAA AGCGTTACCG
CAACGCGTAC AGTTCTCGTT CTACGCCGAC GAACAGGCAC AATTGCTCGC GCTGCAAGGC
CATCAGGCCG ACGTGATGGG CACCTTCACC GTGCAGGGCG GCGCCGGCAT TCTGAACAAT
CCGGATTACA AGGCCGTGGG CGTGAAGTCG AGCGCGCACC GGCAGATTCA CATGCGCAAC
GACAATCCGC TGTTCAAGGA CAAGCGCGTG CGCCAGGCGC TGGCGTTGTC GATCGATCGC
GACGTGCTGG TGCGCGGCCT GTTCAAGGGG CGCGCGCAAC TCGGCAACGA CAGTCCGTTC
GCGCCGGTGT TTCCGTCTTC GGATGCGGGT GTTCCGCAAC GCAGGATCGA CGTCGCCAAA
GCGAAGCAAC TGCTTGCGCA AGCCGGCGTG CCGAACGGTT TCGACGTGAC GCTGACCACC
GAAAAATACA TGGAGATTCC CGATCTCGCG GTGGTCGTGC AGAACGCGGC GAAGGCCATT
GGCGTGCGCA TCAATCTGAA GATCGAAAGC CAGTCGCTGT ATTACGGCGC GGGCACGCCG
GGCAAGTCGG ACTGGCTGGA CTCGCCGCTC GGCATTACCG ACTACGGTCA TCGCGGCGTG
CCGAACGTTT TTCTGAATGC ACCGCTCACC AGCACCGGCA CATGGAACGC CGCGCACTTC
AGGAATCCGC AATACGATCA ACTGGTCGCA CAATTCGTCG CGGCCATCGA TCTCGGCTCG
CAGCGGAAAA TCGCCGGGCA GATCCAGACG CTGCTGCTCG ATGAAACGCC CATCATCATT
CCGTTCTTCT ACGATCAGCT GATCGCCATG CGCAAGGGTG TGAACGGCGT GCGCTTCACC
GCGCTCGCGC AGCTCTACTT CGACCGCGCG GTGTTGAGCG CGTAA
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| Protein sequence | MKIPANRFPA LGAARLIADA YGNHAIDEFV AGRITRRDLL RYASVIGLSL AGASVLNAPQ
ARAQGTAAAS NQTIRVAHLT PAGAVDPLTV TDAASLALLN QTGEFLIDDD GEKLVLKPAL
ALSWKPNDKG DVWTFKLRPN VKFHDGQLFS AKDVVATFDR LADPASGSAA LSVLKGVLSK
GGARVVDDHT VAFHLDAPNG NFPYYVSSDN YNAVILPANY AGGYEKSFIG TGPFKLEKYQ
AKVGASFVRN PDYWGEKALP QRVQFSFYAD EQAQLLALQG HQADVMGTFT VQGGAGILNN
PDYKAVGVKS SAHRQIHMRN DNPLFKDKRV RQALALSIDR DVLVRGLFKG RAQLGNDSPF
APVFPSSDAG VPQRRIDVAK AKQLLAQAGV PNGFDVTLTT EKYMEIPDLA VVVQNAAKAI
GVRINLKIES QSLYYGAGTP GKSDWLDSPL GITDYGHRGV PNVFLNAPLT STGTWNAAHF
RNPQYDQLVA QFVAAIDLGS QRKIAGQIQT LLLDETPIII PFFYDQLIAM RKGVNGVRFT
ALAQLYFDRA VLSA
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