| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0710 |
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| Symbol | |
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| ID | 4005700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4096768 |
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| End bp | 4098315 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637948920 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_560276 |
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| Protein GI | 91785070 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.437206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAC ACTCTCTGAT TGCAGTGGCG GTCGCGCTGT TCGCGGCGGG TTGCACGATG
GCGCCGAAAT ATGAGCGCCC GGCCGCACCC GTCACGGCGA CCTTCCCGAC CGGCGGCGTG
TACGACACGC AACCGGGCGC GACCCAGCCG GGCCAGCAGC AGCCCGGCAC GACAGGCGCC
GCGCGCACCG CGAGCGGCCA GGCCGCGGCG GATATCGGCT GGCGCGATTT CTTCGTCGAT
CCGCGCATGC AGCGGTTGAT CGAGATCGCG CTGAAGAACA ACCGCGATCT GCGCGTGTCG
GTGCTGAACA TGCAGGCTTC GGCCGCGCAG TTCCGGATCG TTCGCGCCGG CCTGCTGCCT
ACGCTCGACG CCTCGGCGTC GCAAACCAAG CAGCGCACGC CTAAAGACCT GTCGTTCTTC
GACCAGACGA TTTCCAACTC GTACTCGGTC GGGCTGAACG CGTCGTGGGA AATCGACTTC
TTCGGGCGGA TTCAGAGCCT GAAGGATCAG GCGTTGGCGC AGTACCTGGC CACGGCTCAG
GCGCGCAAGG CGGCGGAAAT CACGCTGGTC TCGCAGGTGG CGAACCAGTA CATGACGGTG
CTCGAACTCG ACGACCTGCT GAAGGTCACC GAGAACACGT TGAAGACCTC GCAGGAATCG
TATCGGATCG CCAAGCTGCA GTTCGACAAC GGTACGGGTT CGGAACTGGA TCTGCGCCAG
TCGCAAACCG TGGTCGAGCA GGCCCTGGCC AACCTGCAGC AGCAGCAGCG GCTGCGGGCT
CAGGCGGATA ACGCGCTCGT GCTGCTTCTC GGCGAGCCGT TGCCGGACGA TCTGCCGCCG
GGCATGACGC TGGACAACCA GAATCTGCTC ACGGATATTC CGGCGGGTCT GCCGTCCGAT
CTGCTGACGC GCCGGCCGGA CATCATGGAG GCCGAAGAGA ATCTGCTGGC CGCCAACGCG
AACATCGGCG CGGCGCGGGC CGCGTTCTTC CCGAAGGTTT CGCTGACCGG CAGCTTCGGT
ACGCTGAGCC CGTCGCTCGG CGGGTTGTTC AAGCCGGGTT CGGCGGCGTG GAGCTTCGCG
CCGTCGATCA CGCTGCCGAT CTTCGAAGGC GGGCAGAATC TTGCCAACCT CGATCTCGCC
AACATCCAGA AGAAAGTCCA GATCGCCACG TATGAAAAGG CGATCCAGAC GGCCTTCCGC
GAAGTGGCAG ACGCCCTGGC GGCACGCGGC ACGTACGATC AGCAGATCCA GGCGCTGGAG
CGCAATACTT TTGCGGAACA ACGCCGGCTG GATCTGTCGA ATCTGCGCTA TACGAATGGC
GTCGATAGTT ATCTGTCGGT GCTGACCGCG CAGACGGATC TGTATTCGTC GCAGCAGTTG
CTGGTCACGG CCCGGATGGA ACGTCTGCAG AACCTCGTGA CGTTGTATCA GGCACTGGGC
GGCGGCTGGG TCGAGCACAA CGGCGATCAG CCGCGGCCGG CCGACGCGCC GGTCGACTAC
GGTGCGGCGA GTGCGCCGGT GGCGGCTTCG GCCGCTACGG CGGGTTGA
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| Protein sequence | MQKHSLIAVA VALFAAGCTM APKYERPAAP VTATFPTGGV YDTQPGATQP GQQQPGTTGA
ARTASGQAAA DIGWRDFFVD PRMQRLIEIA LKNNRDLRVS VLNMQASAAQ FRIVRAGLLP
TLDASASQTK QRTPKDLSFF DQTISNSYSV GLNASWEIDF FGRIQSLKDQ ALAQYLATAQ
ARKAAEITLV SQVANQYMTV LELDDLLKVT ENTLKTSQES YRIAKLQFDN GTGSELDLRQ
SQTVVEQALA NLQQQQRLRA QADNALVLLL GEPLPDDLPP GMTLDNQNLL TDIPAGLPSD
LLTRRPDIME AEENLLAANA NIGAARAAFF PKVSLTGSFG TLSPSLGGLF KPGSAAWSFA
PSITLPIFEG GQNLANLDLA NIQKKVQIAT YEKAIQTAFR EVADALAARG TYDQQIQALE
RNTFAEQRRL DLSNLRYTNG VDSYLSVLTA QTDLYSSQQL LVTARMERLQ NLVTLYQALG
GGWVEHNGDQ PRPADAPVDY GAASAPVAAS AATAG
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