| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0709 |
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| Symbol | |
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| ID | 4005701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4098317 |
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| End bp | 4101526 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637948921 |
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| Product | RND efflux hydrophobe/amphiphile efflux-1 family protein |
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| Protein accession | YP_560277 |
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| Protein GI | 91785071 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.125833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGT TCTTCATTGA TCGCCCGATT TTTGCATGGG TGATCGCCAT TATTCTGATG
CTCGCGGGTA TCGCGTCGGT CTTTACGCTG CCGATCGCGC AATACCCGAC CATCGCGCCG
CCGGCCGTGC AGATCAGCGC TACGTACCCG GGCGCCTCGG CGAAGACGGT GGAAAACACC
GTCACGCAGG TGATCGAGCA GCAGATGAGT GGTCTCGACC ACTTGCTGTA CCTGTCGTCC
ACGTCGGACG ACTCGGGCAC GGCAACCATC ACGCTGACGT TCGCGGCCGG CACCAATCCT
GACATCGCGC AGGTGCAGGT GCAGAACAAG CTGCAGCTCG CCACGCCGCT GCTGCCGCAA
GCCGTGCAAC AGCTGGGCAC CAAGGTCACG AAGTCGAGCA GCAGCTTCCT GCTGGTCATG
GCGTTCGTGT CCGAAGACGG CAGCATGAAC AAGTACGACC TGGCGAACTA CGTCGCGTCG
AACATTCAGG ATCCGGTCAG CCGTATCGAC GGCGTGGGCA CGGTGACGCT GTTCGGCTCG
CAGTACGCCA TGCGGATCTG GCTGGACGCG AACAAGCTCA CCAACTTCGG CCTCACGCCG
GTGGATGTGC AAACGGCGTT GACGGCGCAG AACGTGCAGG TCGCGGGCGG TTCGCTCGGC
GGCACGCCGT CGGTGCCGGG CCAGGTGTTG CAGGCCACCA TCACGGAAGC CACGCTGCTG
AACACGCCTG AACAGTTCGG CAACGTGTTG CTGAAGGTGA ACCCGGACGG CTCGCAGGTC
CGTATCAAGG ACGTCGGCCG CATCGAGCTG GGTGGCGAAA ACTACAACTT CGACACCAAG
TACAACGGCC AGCCTACGGC AGGCTTCGGT ATTCAGCTCG CTACCGGCGC GAACGCGCTG
GCCACCGCCA CGGCGGTGCG CGCGAAGGTC GCCGAACTGT CCAAGTACTT CCCGCACGGT
CTGGTCGTGC AGTACCCGTA CGACACCACG CCGTTCGTGC GCCTGTCGAT CGAAGAAGTG
GTCAAGACGC TGCTCGAAGG TATCGTGCTG GTGTTCCTGG TCATGTACCT GTTCCTGCAG
AACCTGCGCG CCACGCTGAT CCCGACGATC GCCGTGCCGG TGGTGCTGCT GGGCACGTTC
GCGATCATGG GGCTGGTGGG CTTCTCGATC AACACGCTGT CCATGTTCGG GCTCGTGCTG
GCGATCGGCT TGCTGGTGGA CGATGCGATC GTGGTGGTGG AAAACGTCGA GCGGGTGATG
CAGGAGGAGG GCTTATCGCC TCGTGATGCA ACCCGCAAGG CGATGGATCA GATTACTGGC
GCGCTGGTCG GCGTGGCGCT CGTGTTGTCG GCGGTGTTCG TGCCGGTGGC GTTCTCGGGC
GGTTCGGTCG GCGCAATTTA CCGGCAGTTC TCGCTGACGA TCGTGGCGGC CATGGTGCTG
TCCGTGCTGG TGGCGTTGAT TCTGACGCCG GCATTGTGCG CGACGATCCT CAAGCCGATC
GAAAAGGGTC ATCAGGAAAA AACCACCGGT TTCTTCGGCT GGTTCAACCG CACCTTCAAC
AAGAGCCGCG ACAAGTATCA CTCCGGCGTG CACCACGTGA TCAAGCGCTC GGGCCGCTGG
CTGATCATCT ATATGGTAGT GATTTTCGCG GTCGGCCTGC TGTTCGTGAA GTTGCCCAAG
TCGTTCCTGC CTGACGAAGA CCAGGGCACG ATGTTCGTGC TGGTGCAAAC GCCGTCGGGC
TCGACGCAGG AAACCACGGC GCGCGCGTTG AAGGACGTGT CCGACTATCT GCTCAACACC
GAGAAGAGCA TCGTCGAATC GACCTTTACC GTGAACGGCT TCAGCTTTGC CGGTCGCGGC
CAGAATGCGG GTCTCGTGTT CGTGCGCATG AAGGATTACG CGCAACGTCA GCACTCGGAC
CAGAAGGTGC AGGCGCTGGT GGGCCGTCTC TTCATGCACT TCGGCAGCTA CAAGAACGCG
CTGGTGTATC CGGTGAATCC GCCGTCGATT CCTGAACTCG GCACCGCCGC GGGCTTCGAC
TTCGAATTGC AGGATCGCGC GGGCGTCGGT CACGAAAAGC TGATGGAAGC ACGCAATATG
TTGCTGGGCA TGGCGGCGAA AGATCCGACG CTGGCTCAGG TGCGTCCGAA CGGCCTGAAC
GACACGCCGC AGTTCAAGGT GGATATCGAC CACGAGAAGG CTTCGGCGCT CGGCGTGTCG
CTGTCCGCGA TCGACCAGAC GTTCTCGATC GCGTGGGCGT CGCAGTACGT GAACAACTTC
CTCGATACCG ACGGCCGGAT CAAGAAGGTG TATTTGCAGG GCGACGCGCC GTTCCGCATG
AAACCGGAAG ACCTGAACGC GTGGTACGTG CGTAATGGCG CGGGTAACAT GGTGCCGTTC
TCGTCGTTCG CGAGCGGCAC GTGGACCTAC GGTTCGCCGA AGCTGGAACG CTACAACGGT
ATTTCCGCGG TGGAAATCCA GGGCGCGGCG GCACCGGGCA AGTCGACCGG TCAGGCCATG
ACGGCGATGG AAGCCCTGGT GGCGAAGCTG CCGGCGGGTG TCGGCTACGA ATGGACGGGC
CTGTCGCTGC AGGAGCGCCA GTCCGGTTCG CAGGCGCCGA TTCTGTACGG CATCTCGATC
CTCGTCGTGT TCCTGTGTCT CGCGGCACTG TATGAAAGCT GGTCGATCCC GTTCTCGGTG
ATCATGGTGG TGCCGCTCGG CGTGATCGGC GCACTGCTGG CCGCCACGCT GCGCGGGCTC
GAGAACGACG TGTTCTTCCA GGTGGGTCTG TTGACCACCG TGGGCCTGTC GGCGAAGAAC
GCGATTCTGA TCGTGGAATT CGCCCGCGAA CTGCAGCAGA GTGAAGGCAT GGGGCCGGTC
GAGGCCGCGC TGGAAGCAGC GCGTCTGCGG CTGCGTCCAA TCCTGATGAC CTCGCTCGCG
TTCATTCTCG GCGTGATGCC GCTCGCCATC AGTAACGGCG CGGGCTCGGC CAGCCAGCAC
GCGATCGGTA CCGGCGTGAT CGGCGGGATG TTGACGGCGA CCTTCCTCGC GATTTTCATG
ATCCCGATGT TCTTCGTCGT GATCCGTGCG AAGTTCGGCG GCGAGAAGGA AGACCCGGAT
GAGGCGCTCG CACACTATAA CCAGCACCAT CCGCATGACG GCCAGGGCGG CGGGGCGGCT
GATGAAGGCT CGGGCAAGGA CGGACACTGA
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| Protein sequence | MAKFFIDRPI FAWVIAIILM LAGIASVFTL PIAQYPTIAP PAVQISATYP GASAKTVENT
VTQVIEQQMS GLDHLLYLSS TSDDSGTATI TLTFAAGTNP DIAQVQVQNK LQLATPLLPQ
AVQQLGTKVT KSSSSFLLVM AFVSEDGSMN KYDLANYVAS NIQDPVSRID GVGTVTLFGS
QYAMRIWLDA NKLTNFGLTP VDVQTALTAQ NVQVAGGSLG GTPSVPGQVL QATITEATLL
NTPEQFGNVL LKVNPDGSQV RIKDVGRIEL GGENYNFDTK YNGQPTAGFG IQLATGANAL
ATATAVRAKV AELSKYFPHG LVVQYPYDTT PFVRLSIEEV VKTLLEGIVL VFLVMYLFLQ
NLRATLIPTI AVPVVLLGTF AIMGLVGFSI NTLSMFGLVL AIGLLVDDAI VVVENVERVM
QEEGLSPRDA TRKAMDQITG ALVGVALVLS AVFVPVAFSG GSVGAIYRQF SLTIVAAMVL
SVLVALILTP ALCATILKPI EKGHQEKTTG FFGWFNRTFN KSRDKYHSGV HHVIKRSGRW
LIIYMVVIFA VGLLFVKLPK SFLPDEDQGT MFVLVQTPSG STQETTARAL KDVSDYLLNT
EKSIVESTFT VNGFSFAGRG QNAGLVFVRM KDYAQRQHSD QKVQALVGRL FMHFGSYKNA
LVYPVNPPSI PELGTAAGFD FELQDRAGVG HEKLMEARNM LLGMAAKDPT LAQVRPNGLN
DTPQFKVDID HEKASALGVS LSAIDQTFSI AWASQYVNNF LDTDGRIKKV YLQGDAPFRM
KPEDLNAWYV RNGAGNMVPF SSFASGTWTY GSPKLERYNG ISAVEIQGAA APGKSTGQAM
TAMEALVAKL PAGVGYEWTG LSLQERQSGS QAPILYGISI LVVFLCLAAL YESWSIPFSV
IMVVPLGVIG ALLAATLRGL ENDVFFQVGL LTTVGLSAKN AILIVEFARE LQQSEGMGPV
EAALEAARLR LRPILMTSLA FILGVMPLAI SNGAGSASQH AIGTGVIGGM LTATFLAIFM
IPMFFVVIRA KFGGEKEDPD EALAHYNQHH PHDGQGGGAA DEGSGKDGH
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