| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0564 |
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| Symbol | |
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| ID | 4005847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 4263439 |
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| End bp | 4264320 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637949066 |
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| Product | spermidine synthase |
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| Protein accession | YP_560421 |
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| Protein GI | 91785215 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.416635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCTC CACTGCTGTT CCGACCGAGT CTCGATGCCG TCTACGGATT TCCGCACGCG
AAGCGCGTGA CGCAAGTCGT ATCGCCTTAC CAGCGGATCG AAGTCTGGGA CACGCCGCAG
CTCGGCCGGC TCTTCACGCT CGACGGCCGT CCCATGACGT CCACCGGCGA CGAGTTCATC
TATCACGAAT GCATGGTGCA TCCGGCCGCG CTGGCGCATC CGTCGCCGCA AGCGGCGCTC
GTACTGGGCG GCGGCGACGG CGGCGCCGCG CGGCAATTGC TGCGGCATGC GGGCATCGAA
CGGATCGTGG TGGCGGAACT GGACGCCGAA GTGGTGCGCC TGACGCGCGA GCATTTGCCC
GAAGTGCACG GCGGCGCGTT CGACGATCCG CGCGTCGAAC TCGTGATCGG CGACGCCGCG
CATTATGTCG CGCACGCCGC GCCGGCGCGG TTCGATCTCG TCGTGTTCGA CCTGACGCCG
CCCGACTCGC CCGCCGCCGG TCTTTACACG CCAACGTTCT ATCAGCAGCT CAAGCGGGTC
ATGCGCCCGA TCGCCGCGGT CTCCGTGCAT CTCGGCTCGC CGTATTTCCA CGCCGCGCGT
ATCGCGCGCC TGCTCGACGA CTTGCGCGCG GCGTTCGCCG TGGTCCGCAC CATGAACACG
TTTATTCCGC TGTACGGCTC GCTCTGGATA ATGGCAACGG CGAGCGACAC GCTCGACCCT
GCCGCCCTCG CCGCCGATAC GCTCATCGAG CGCCTCGCCG CGCGGCGGAT CGGCCCCCTG
ATGCATTACG ACGCGGGCAC GCACGCCGCA CTGTTCTCGG CATCCCGCTC GGTGCGCGAT
AAACTAAGAC GCTGTTGCGA AATTAAGTTT TGGGTCTGTT AA
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| Protein sequence | MSAPLLFRPS LDAVYGFPHA KRVTQVVSPY QRIEVWDTPQ LGRLFTLDGR PMTSTGDEFI
YHECMVHPAA LAHPSPQAAL VLGGGDGGAA RQLLRHAGIE RIVVAELDAE VVRLTREHLP
EVHGGAFDDP RVELVIGDAA HYVAHAAPAR FDLVVFDLTP PDSPAAGLYT PTFYQQLKRV
MRPIAAVSVH LGSPYFHAAR IARLLDDLRA AFAVVRTMNT FIPLYGSLWI MATASDTLDP
AALAADTLIE RLAARRIGPL MHYDAGTHAA LFSASRSVRD KLRRCCEIKF WVC
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