Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0561 |
Symbol | |
ID | 4005850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 4265760 |
End bp | 4266515 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637949069 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_560424 |
Protein GI | 91785218 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.535784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.280221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATTT TTCTGATGCC ACGCTTCTTC GTCGGTACGC CCCTCCAGTC CGACGACATC ATGCAGCTTC CCGATGACGT CGTTCGGCAT GTGCTCGTGC TGCGGTTGCA GCCCGGCGAC TCGATCGTGC TTTTCAACGG CGAAGGCGGC GAATACAGCG CCGAACTCGT CGAGGTCGAA CGCCGCTCGG CCAAGGTAAG AATTCGCGAA TTCCGCAACA TCGAAGTGGA AGCGCCGTAT CGGCTCACGC TTGCGCAGGG CATCGCCGGC GGCGACAAGA TGGACTGGCT GATCGAAAAG GCCGTCGAAC TCGGCGCGTC GGCCTTCGTG CCGCTCACCA CCACGCGCAG CGTCGTGCGT CTGACTGGCG AGCGCGCGCA GCGGCGGCAT GCGCACTGGC AAGGCATCGT GCGGGCGTCG TGCGAGCAGT GCGGGCGCAA CCGGCTGCCG GAAGTCATGC CGGTGCGAGA AATCGCCACC TGGCTGGGCG CCATGCCGCG CACGCCTGAA GAAGGCGACT TGCGCATTCT GCTGTCGCCG CGCGCGAGCA TCAGCTTTTC CGCGTTGCCC GCCGAGCCGC CGCAAGGACG CGTGACGGTG CTGGTCGGCC CGGAAGGCGG ATTTTCCGCC GCTGAAGAAG CGGCCGCGAC CGATCATGGC TTCACCGCCG TCGGTCTTGG CCCGCGCGTC ATGCGCACTG AAACAGCCGG CATCGCGGTA CTCTCGGCGC TCGCCGCGGG CTGGGGCGGC TGGTAA
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Protein sequence | MSIFLMPRFF VGTPLQSDDI MQLPDDVVRH VLVLRLQPGD SIVLFNGEGG EYSAELVEVE RRSAKVRIRE FRNIEVEAPY RLTLAQGIAG GDKMDWLIEK AVELGASAFV PLTTTRSVVR LTGERAQRRH AHWQGIVRAS CEQCGRNRLP EVMPVREIAT WLGAMPRTPE EGDLRILLSP RASISFSALP AEPPQGRVTV LVGPEGGFSA AEEAAATDHG FTAVGLGPRV MRTETAGIAV LSALAAGWGG W
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