Gene Bxe_A0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A0561 
Symbol 
ID4005850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp4265760 
End bp4266515 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content66% 
IMG OID637949069 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_560424 
Protein GI91785218 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.535784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.280221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTT TTCTGATGCC ACGCTTCTTC GTCGGTACGC CCCTCCAGTC CGACGACATC 
ATGCAGCTTC CCGATGACGT CGTTCGGCAT GTGCTCGTGC TGCGGTTGCA GCCCGGCGAC
TCGATCGTGC TTTTCAACGG CGAAGGCGGC GAATACAGCG CCGAACTCGT CGAGGTCGAA
CGCCGCTCGG CCAAGGTAAG AATTCGCGAA TTCCGCAACA TCGAAGTGGA AGCGCCGTAT
CGGCTCACGC TTGCGCAGGG CATCGCCGGC GGCGACAAGA TGGACTGGCT GATCGAAAAG
GCCGTCGAAC TCGGCGCGTC GGCCTTCGTG CCGCTCACCA CCACGCGCAG CGTCGTGCGT
CTGACTGGCG AGCGCGCGCA GCGGCGGCAT GCGCACTGGC AAGGCATCGT GCGGGCGTCG
TGCGAGCAGT GCGGGCGCAA CCGGCTGCCG GAAGTCATGC CGGTGCGAGA AATCGCCACC
TGGCTGGGCG CCATGCCGCG CACGCCTGAA GAAGGCGACT TGCGCATTCT GCTGTCGCCG
CGCGCGAGCA TCAGCTTTTC CGCGTTGCCC GCCGAGCCGC CGCAAGGACG CGTGACGGTG
CTGGTCGGCC CGGAAGGCGG ATTTTCCGCC GCTGAAGAAG CGGCCGCGAC CGATCATGGC
TTCACCGCCG TCGGTCTTGG CCCGCGCGTC ATGCGCACTG AAACAGCCGG CATCGCGGTA
CTCTCGGCGC TCGCCGCGGG CTGGGGCGGC TGGTAA
 
Protein sequence
MSIFLMPRFF VGTPLQSDDI MQLPDDVVRH VLVLRLQPGD SIVLFNGEGG EYSAELVEVE 
RRSAKVRIRE FRNIEVEAPY RLTLAQGIAG GDKMDWLIEK AVELGASAFV PLTTTRSVVR
LTGERAQRRH AHWQGIVRAS CEQCGRNRLP EVMPVREIAT WLGAMPRTPE EGDLRILLSP
RASISFSALP AEPPQGRVTV LVGPEGGFSA AEEAAATDHG FTAVGLGPRV MRTETAGIAV
LSALAAGWGG W