| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0481 |
|---|
| Symbol | murE |
|---|
| ID | 4005931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 4348368 |
|---|
| End bp | 4349924 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637949150 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
|---|
| Protein accession | YP_560504 |
|---|
| Protein GI | 91785298 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGC TGCGTCAGAA GCATCCCGCG CAGCGGCAGA TCGCCGACGC CCTCACCTGG
CTGCACGCTC ACGTGCAGCC AGGTGCGCAT CTGCACGCCG ACACGCGCTC GCTCGCGGCG
GGCGACGCGT TTTTCGCCTA CGCGGTGGAC GGCGCGGACA ACCGCCCGTT CATCGAGGGT
GCGATCGAGC GTGGCGCCGC CGCCGTGCTG GTTCAGCCCG AGGGCTTCAG CGGCGCGATC
AATCCGTCGA ACATGCTCGC CGTGCCGGCG TTGAACGAAC TCGCGGGTTC GATCGCGAGC
GGCTGGTACA ACGACCCGAG CGACAGCATG CTCACGGTCG GCATTACCGG CACGAACGGC
AAGACTTCGT GCAGCCAGTG GATCTCGGCG GCGCTGACGG CGCTCGGCAC GCGTTGCGCG
ATCATCGGCA CGCTCGGCAC GGGTTTGCCG GGTCACCTGG TGCACACGGG TTTCACCACC
CCCGACGCGC CGCAACTGCA ACGCAGCCTT GCGCAATTGC GCGACGCGGG TGCGCAGGCG
GTAGCGATGG AAGTGTCGTC GCATGCGCTG CACCAGGGCC GCGTGAACGG CACGGCGTTC
GACATCGCCG TATTCACGAA TCTCACGCAG GACCATCTCG ACTATCACCA GACATTCGAA
GCCTACGAAG CCGCCAAAGC GCGCCTCTTC GCCTGGCCGG AACTGCGTGC GGCGGTGATC
AATCGCGACG ATGCGGCCGG CCGCCGTTTG CTCGCGAGCA CGCAAGGCCA CGCGCGCACG
ATCGCGTACG GGCTCGACAG CGGGCAAGGC GCGCTGCAGG ACGCACCGCA AGCCGACGCG
TTGCTGCTCG CCTCGAATGT GCGCGCCACG GCCACCGGTA CCGCGTTCCA TCTGAGCACC
TCGGACTGGG GCGATGCCGA AGTCGAAGTG CAAACGCTCG GCGCGTTCAA CGTGAGCAAT
CTGCTCGGCG TGCTGGGGGC ATTGCTCGCC GCCGACGTGC CGTTCGAAGC CGCGCTGGCC
GAACTGGCGC AGCTCGAACC GGTGAACGGC CGCATGCAGC GTCTGGGCGG CCGCTTGCAG
AACGACGAAC CGCTCGTCGT GATCGATTAC GCGCACACGC CGGATGCGCT GGAAAAAACA
CTCGAAGCGC TGCGCCCGAT GGTAACCGCG CGCGGCGGCG AACTGATCTG CATGTTCGGC
TGCGGCGGCG ACCGCGACGC CACCAAGCGT CCGCTGATGG GCGCGATTGC CGAGAAGATC
GCCGACGGCG TGGTGGTGAC CAGCGACAAC CCGCGCAGCG AAGATCCGCA ATCGATCATC
GAGCAGATCG CGGCGGGTAT GAAAGACGCG TCGAAGGCGC GCCGTATCGA GGACCGCGCA
AGTGCGATCC TGCAGGCGAT CCGCAGCGCC GCGCGCGAAG ACGTCATCGT GCTGGCCGGC
AAGGGGCATG AAGCAACACA GGAAATCATG GGTAAGAAAC GCGCTTTCTC CGATCAGGAT
CACGCGCGCC TCGCGCTGGC CGCACGCGCG ACGCACGCAC GCGGAGGTGG CGAATGA
|
|---|
| Protein sequence | MSALRQKHPA QRQIADALTW LHAHVQPGAH LHADTRSLAA GDAFFAYAVD GADNRPFIEG
AIERGAAAVL VQPEGFSGAI NPSNMLAVPA LNELAGSIAS GWYNDPSDSM LTVGITGTNG
KTSCSQWISA ALTALGTRCA IIGTLGTGLP GHLVHTGFTT PDAPQLQRSL AQLRDAGAQA
VAMEVSSHAL HQGRVNGTAF DIAVFTNLTQ DHLDYHQTFE AYEAAKARLF AWPELRAAVI
NRDDAAGRRL LASTQGHART IAYGLDSGQG ALQDAPQADA LLLASNVRAT ATGTAFHLST
SDWGDAEVEV QTLGAFNVSN LLGVLGALLA ADVPFEAALA ELAQLEPVNG RMQRLGGRLQ
NDEPLVVIDY AHTPDALEKT LEALRPMVTA RGGELICMFG CGGDRDATKR PLMGAIAEKI
ADGVVVTSDN PRSEDPQSII EQIAAGMKDA SKARRIEDRA SAILQAIRSA AREDVIVLAG
KGHEATQEIM GKKRAFSDQD HARLALAARA THARGGGE
|
|---|
| |