| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0474 |
|---|
| Symbol | |
|---|
| ID | 4005938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 4356269 |
|---|
| End bp | 4357942 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637949157 |
|---|
| Product | Long-chain-fatty-acid--CoA ligase |
|---|
| Protein accession | YP_560511 |
|---|
| Protein GI | 91785305 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAA TCTGGCTGAA ATCTTATCCA CCCGGCGTTC CCGCAGAGAT TGACCCAAGC
CGCTACTCGT CGGTCGGAGA ACTGCTCGAA GAAGCATTCC GCGACCACCG CGCCAAGCCG
GCGTTCGTCT GCATGGGCAA GGAAATCAGC TACGGCGAGC TCGACGTGCT TTCGCGCAAA
CTCGCCGCAT GGCTTCAGTC GAAGGGCTTG GCCCGCGGCG CACGCATTGC GATCATGATG
CCGAACGTGC TGCAATATCC GGTGGCGATT GCCGCTATCC TGCGCGCGGG CTACGTGGTC
GTGAACGTGA ACCCGCTTTA CACCCCGCGT GAGTTGGAGC ATCAGCTCAA GGACAGTGGC
GCCGAGGCGA TCATTCTGCT CGAGAACTTC GCCGTCACGC TGCAGGCGAT CGTACGCAAC
ACCTCGGTCA AGCATGTTGT CGTGGCCGCG ATGGGCGATC TGATGGGGCT GAAGGGCACG
CTGGTGAACT TCGTCGTGCG CAAGGTGAAG AAGATGGTGC CGGCGTGGAG CCTGCCAGGT
CACGTCAGGT TCAATACCGC GATCGCGCAA GGTGGACGCC AGAATTTCGA GCCGGTCCAG
CAAGGTCCGA ACGATGTCGC GTTTCTCCAG TACACGGGCG GCACGACGGG CGTGGCCAAG
GGCGCGACGC TGCTGCATCG GAACCTGATC GCCAACGTGC TGCAGTCGGA AGTCTGGCTC
GATCCGGTGC GCGCGAATCG TACTGATATC GATCAGTTCA TCACCGTGGT TGCATTGCCT
TTGTATCACG TGTTTGCGTT GACGGTCTGC GGGTTGCTGA CAATCCGTAC CGGCGGCCTT
GGCGTGCTGA TTCCGAATCC GCGCGACATT CCGGGCATGA TCAAGGCGCT CGAAGGGTAT
GCGATCACGA CCATTCCCGC CGTCAACACG CTCTACAACG CGATGTTGAA TAGCCCCGAT
TTCCATAAGC TCGATTTTTC GAAGCTGATC GCTGCGAACG GCGGCGGTAT GGCGGTACAG
GAGGCTGTGG CCAGGCGCTG GTACGAGCAG ACGCACACGC CGATCATTGA AGGCTACGGC
TTGTCGGAAA CGTCGCCGTG CGTGACCTGC AATCCGGTGA CCGTCACCGA ATACAGCGGG
ACGATCGGTT TGCCGCTGCC GTCGACGGAA ATCTCGATTC GAGACGACGA AGGCAACGAA
GTGCCACTCG GCCAGCCGGG CGAAATCTGC ATCCGTGGCC CGCAGGTCAT GGCAGGTTAT
TGGAACCGGC CCGACGAAAC GGCGAAAGTG ATGACGGAGG ATGGCTTCTT TAAATCGGGC
GATGTCGGCC TGATGAACGA ACGCGGCTTC GTCAAGATCG TCGACCGCAA GAAGGACATG
ATTCTGGTGT CCGGTTTCAA TGTCTATCCG AACGAAATCG AAGACGTGGT CGCCAAACTG
CCGGGCGTGT TCGAAGTCGC CGCGGTCGGC GTGCCCGATC AGCATTCGGG CGAGGCGGTG
AAACTGTTCG TCGTGAAGAA GGATCAGGCT CTTACCGATG CGGACATCTT TGCGTACTGC
AAGCAGCAAC TGACCGGTTA CAAGCGGCCG AAGATCGTCG AATTCCGCAC GGAACTGCCG
AAGAGCAACG TCGGCAAGAT ACTGCGCCGG GAGTTGCGTG ACGGGCGGGC GTAG
|
|---|
| Protein sequence | MDKIWLKSYP PGVPAEIDPS RYSSVGELLE EAFRDHRAKP AFVCMGKEIS YGELDVLSRK
LAAWLQSKGL ARGARIAIMM PNVLQYPVAI AAILRAGYVV VNVNPLYTPR ELEHQLKDSG
AEAIILLENF AVTLQAIVRN TSVKHVVVAA MGDLMGLKGT LVNFVVRKVK KMVPAWSLPG
HVRFNTAIAQ GGRQNFEPVQ QGPNDVAFLQ YTGGTTGVAK GATLLHRNLI ANVLQSEVWL
DPVRANRTDI DQFITVVALP LYHVFALTVC GLLTIRTGGL GVLIPNPRDI PGMIKALEGY
AITTIPAVNT LYNAMLNSPD FHKLDFSKLI AANGGGMAVQ EAVARRWYEQ THTPIIEGYG
LSETSPCVTC NPVTVTEYSG TIGLPLPSTE ISIRDDEGNE VPLGQPGEIC IRGPQVMAGY
WNRPDETAKV MTEDGFFKSG DVGLMNERGF VKIVDRKKDM ILVSGFNVYP NEIEDVVAKL
PGVFEVAAVG VPDQHSGEAV KLFVVKKDQA LTDADIFAYC KQQLTGYKRP KIVEFRTELP
KSNVGKILRR ELRDGRA
|
|---|
| |