| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0454 |
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| Symbol | |
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| ID | 4005963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4384648 |
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| End bp | 4386438 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637949182 |
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| Product | metalloprotease, zinc binding |
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| Protein accession | YP_560531 |
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| Protein GI | 91785325 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.573755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGA TCCGCTACAC CATCGTTCCC AAACAGCCCG CCGCCCACCT GTTCGAAGTC
ACCGTGACCG TCGCCGACCC CGATCCGGCC GGCCAGCGGT TCATGCTGCC GGTGTGGATT
CCGGGCAGCT ACATGGTGCG CGAGTTCGCC CGCAACATCG TGACGCTGCG CGCTTTCAAC
GACGCCGGCC GCAAGGTGCA CGTCGAAAAG ACCGACAAGC ACACGTGGCA GGCCGCGCCG
GTCAAAGGCG CGCTGACGCT GCGCTACGAG GTCTACGCGT GGGATCTGTC GGTGCGCGCC
GCGCATCTCG ACGACACGAC GGGCTTTTTC AACGGCACGA GCGTGTTCCT CTCGCCGCTC
GGTCACGAGG AAGCGCAGTG CGTGGTCGAT ATCCAGAAAC CGGACGGCGC GGCGTATCGC
AACTGGCGTG TGGCCACCGC GCTGCCGGAA GCACGCGGCA CGAAGCGTTA TGGTTTCGGC
GAGTACCGCG CGCAGAACTA CGACGAGCTG ATCGATCACC CCGTCACGCT GGGCGAATTC
GCGCTGGCCA CGTTCAAGGC GCATGGCGTG CCGCACGACA TCGTGATCGC CGGGCGCGTG
GTCGGGCTGG ACATGGCGCG TCTGTCCGCC GACCTGAAGC GCATTTGCGA AGCGCAGATC
GCGTTGTTCG AGCCCAAGTC GAAGAAAGCG CCAGTGGATC GCTATGTGTT CATGACCCAG
GCCGTCACCG ATGGATACGG CGGGCTGGAG CACCGCGCTT CGACCGCGCT GATCTGCAAT
CGCGGCGATC TGCCGGTGGA AGGGCGCGAG GCGCTGACCG AAGGCTACCG AACCTATCTC
GGCCTGTGCA GCCACGAATA CTTCCACACC TGGAACGTGA AGCGCATCAA ACCGGCCGTG
TTCGCGCCGT ACGACCTGAG CGTCGAAAAC TACACGTCGC TGCTGTGGCT GTTCGAAGGC
TTCACGTCTT ACTACGACGA CCTGATCCTC GTGCGCAGCG GCCTGATTTC GCAGGACGAC
TATTTCGGCC TGCTCGGCAA GGTGATCGGC GGCGTGCAGC GCGGCAGCGG GCGCCTCAAG
CAGAGCGTCG CCGAAAGCTC GTTCGACGCC TGGGTCAAAT ACTACCGGCA GGACGAGAAC
GCGCCGAACG CGATCGTCAG CTATTACACC AAGGGCTCGC TCGTCGCGCT CGCGTTCGAT
CTGACCATCC GCGCGCAGAC CAATAACCGC AAATCGCTCG ACGACGTGAT GCGCTTGCTG
TGGCAGCGCT TCGGCCGTGA CTTCTATCGC GGCAAGCCGG TCGGTGTGGA AGAAAGCGAG
ATCGAGGCGC TGTTCGCGGA AGCGACCGGC GCGAAACTGG CCGGGTTGTT CGCCGAAGCC
GTGCACGGCA CGCGCGATCT GCCGCTCGAC ACGCTGCTCG CGCCGTTCGG CGTCGCGATT
GCGCCCGAGC TCGACAAGAA CGGCAAGCCG TCGCTCGGCG CACGTGTGCG CGGCGGCGCG
GATTGCACGC TCGCGGCGGT TCATGAGGGC AGCGCCGCGC AGAAAGCCGG GCTCTCGGCC
GGCGACGTGC TGATCGCGCT CGACGGCCTG CGCGTGACCG GCTCGAATCT TGACGGGCTG
CTCGCGCGCT ACCAGCCGGG CGCGAAGGTG GAGGTTCACG CTTTCCGCCG CGACGAGTTG
CGCACCACGC AAGTCAAGCT GGACGGCCCT GAGGTGGCGC GCTACAAGCT CGCCGTCAGC
GACAAGCGGC CCGCCGCGCG CAAGGCGCGC GAGTACTGGC TGGCAAGCTG A
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| Protein sequence | MKPIRYTIVP KQPAAHLFEV TVTVADPDPA GQRFMLPVWI PGSYMVREFA RNIVTLRAFN
DAGRKVHVEK TDKHTWQAAP VKGALTLRYE VYAWDLSVRA AHLDDTTGFF NGTSVFLSPL
GHEEAQCVVD IQKPDGAAYR NWRVATALPE ARGTKRYGFG EYRAQNYDEL IDHPVTLGEF
ALATFKAHGV PHDIVIAGRV VGLDMARLSA DLKRICEAQI ALFEPKSKKA PVDRYVFMTQ
AVTDGYGGLE HRASTALICN RGDLPVEGRE ALTEGYRTYL GLCSHEYFHT WNVKRIKPAV
FAPYDLSVEN YTSLLWLFEG FTSYYDDLIL VRSGLISQDD YFGLLGKVIG GVQRGSGRLK
QSVAESSFDA WVKYYRQDEN APNAIVSYYT KGSLVALAFD LTIRAQTNNR KSLDDVMRLL
WQRFGRDFYR GKPVGVEESE IEALFAEATG AKLAGLFAEA VHGTRDLPLD TLLAPFGVAI
APELDKNGKP SLGARVRGGA DCTLAAVHEG SAAQKAGLSA GDVLIALDGL RVTGSNLDGL
LARYQPGAKV EVHAFRRDEL RTTQVKLDGP EVARYKLAVS DKRPAARKAR EYWLAS
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