Gene Bxe_A0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A0445 
SymbolugpC 
ID4005972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp4394680 
End bp4395768 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content64% 
IMG OID637949191 
Productglycerol-3-phosphate transporter ATP-binding subunit 
Protein accessionYP_560540 
Protein GI91785334 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.369014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAC TGACTCTGCA AAGCGTTAAA AAAACCTACG ACGGCAAACA GTTCGTGCTG 
CACGGCATCG ACGTGGACGT CGCCGACGGC GAGTTCGTCG TGATGGTCGG CCCGTCCGGT
TGCGGCAAAT CGACCTTGCT GCGGATGGTG GCGGGACTCG AACGCATCTC CGAGGGCAGC
ATTTCGATCG CCGGCAAAGT GGTCAATCAG CTGGAGCCTA AAGATCGCAA CATCGCGATG
GTGTTCCAGA ACTATGCGCT CTATCCGCAC ATGAGCGTGG CCGAAAACAT GGGCTACGCG
CTGAAGATCG CGGGCGTGGA CCGCGCGCAG ATCCAGAAAC GCGTGAACGC CGCCGCGCAG
ATTCTCGAAC TCGAAGCGCT GCTGCAACGC AAGCCGCGCG AGTTGTCCGG CGGGCAACGG
CAGCGTGTCG CAATGGGCCG CGCGATCGTG CGCGAGCCGG CCGTGTTTCT GTTCGACGAA
CCGCTGTCGA ATCTCGACGC CCGACTGCGC GTGCAGATGC GGCTCGAAAT CCAGCGTCTG
CATGCACGGC TTGCCACCAC GAGTCTGTAC GTGACGCACG ATCAGATCGA AGCGATGACC
TTGGCCCAGC GCGTGATCGT GATGAACAAG GGCCACGCCG AGCAGATCGG CGCGCCGACC
GAAGTCTATG AGCGGCCCGC CACGGTGTTC GTTGCGAGCT TCATCGGCTC GCCGGGAATG
AATCTGCTGG AAGGCCGCGT GTCGGACGAC GGCGCTGTTT TTGCAGTCGC CGGCAACGGT
CCGGAACTGC CGCTCGCGGG CGTGGTATCG ATCGGCCGCG AAGTCGCAAA AGGACGCGAA
TGGACGCTCG GCATCCGCCC GGAACACATG AGCCCGGGTC AGGCGGACGC GCCTCACGCA
ACGCTCACCG TCGATTCCTG CGAACTGCTC GGCGCGGACA ATCTGGCGCA CGGCCGCTGG
GGCAAGCATG ACGTGACGGT GCGCTTGCCG CACGCGCATC GGCCCGCAGC GGGCGAAGCG
CTACAAGTGG CGCTGCCCGC GCAGCATCTG CATTTCTTCG ATCCGGCAAG CGGAAGACGC
GCCAATTGA
 
Protein sequence
MAALTLQSVK KTYDGKQFVL HGIDVDVADG EFVVMVGPSG CGKSTLLRMV AGLERISEGS 
ISIAGKVVNQ LEPKDRNIAM VFQNYALYPH MSVAENMGYA LKIAGVDRAQ IQKRVNAAAQ
ILELEALLQR KPRELSGGQR QRVAMGRAIV REPAVFLFDE PLSNLDARLR VQMRLEIQRL
HARLATTSLY VTHDQIEAMT LAQRVIVMNK GHAEQIGAPT EVYERPATVF VASFIGSPGM
NLLEGRVSDD GAVFAVAGNG PELPLAGVVS IGREVAKGRE WTLGIRPEHM SPGQADAPHA
TLTVDSCELL GADNLAHGRW GKHDVTVRLP HAHRPAAGEA LQVALPAQHL HFFDPASGRR
AN