| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0358 |
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| Symbol | |
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| ID | 4006060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4479902 |
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| End bp | 4481605 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637949279 |
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| Product | putative fimbrial type-4 assembly signal peptide, PilQ-like |
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| Protein accession | YP_560627 |
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| Protein GI | 91785421 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0621067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTCG CGAAGCCATT TCCGGTTGGA TTGTTGGGCG TCGGCGCAGG TGTATCGCCC
GGACTGAAAA TATGTCTCGC TCTGTGTGTC AGCGCGGCGC TGGCTGTCGG GGGTGCGAGC
GCGTCGACTC CACCGTTGCC GCCGTTGCCT GCCGGGATGC CGCTCGACGG TGCGGTTATG
CCAGCCGATC CTCCGTACAG CGCGCCATCG CTGCCACGCG AAGTTACCGC CGACGTGCCC
AATCCGTTTC GTCAGGATTC CGCAGACGAT CCAGACGCAT CGCCTGCCAG TGCGACGGCC
GCCGATGCCG CCGCGGACGG GCCTGCCACC GACGTCAACG CCGCCACCGC CGCTGACGGC
TCCGCGCCGC TACGCAGGCA ATCTGCCGCA GCGGCGCGCG ACAATGCCGC CGGCAGCAGC
GCGCTCGAAG GTCCGCCGGT GCCGCTGCCG CCGCTCGCGC GTCTGAGCGG CGCGCCGCTC
AGTGCCGCCG ATGCCGGCCT CGCCCCCGAC GACAAACCGC TCTCGCTGAA TTTTCAGCGT
GCCGAACTCG GCGCCGTGCT CAATGCGTTT GCCAGGTTCA CGGGGCTGAA CATCGTTGCG
AGCGAGAGAG TGCGCGGTGC AGTCTCGCTA CGGCTCGACA AGGTGCCGTG GCGCACCGCC
TTCGACACCC TGCTCGACGT CAACGGCCTC GCGATGGAGC GGCACGGCAA CGTGATCTGG
GTCGCGCCGA TTGCGGATCT GGCTGCGCGC GAGCGGCAGC GCTTCGAAGC GCACGCCCGG
GCCGCCGATC TCGAGCCGCT CGCCAGCCGC ACGTTCGAAC TGCACTACGC GCATGCGGAG
GACGTCAGGC GCCTGCTGAC CGGTTCGGGC GCCCAGCGCG TCCTGTCCAA ACGTGGTGCC
GCGACCGCCG ATCCGCGCAC CAATCTGCTG TTCGTGACCG ATCTGGAAGC GCGCCTCGCG
CAGATTGCGG CGCTGCTCAC CTCGGTTGAC CGGCCGACGC GCCAGGTATT GATCGAAGCG
CGTATCGTCG AGGGCGAACA CGGTTTTTCG CGCAATCTCG GCGTGAAGCT CTCGATGGCG
ACCAGCAACG CCGACGGCAG CGCGAAAGGT TTGACCGACG CCGCCTACGA TCTGTCGGCC
CGCCCGATCG CCGGTTTCGA TGCGGCGACC GCCGGTCTGA CGTTATTCGC CGCCGGCGCG
ACGCGCTTGC TGAACATCGA GCTGAGCGCG CTCGAAGCAC AGGGGCGCGG CGAAATCGTT
TCGAGCCCGC GCGTGGTCAC GGCGGACCGG ATGAAGGCGG TGGTCGAGCA GGGCACCGAA
CTGCCGTATC AGGCGAAAGT GGGGCAGGGC GTATCGGGCG TGCAGTTTCG GCGCGCCACG
CTCAAACTGG AGGTCGAGCC GCAAATCATG CCGGACGGCC GTGTGGTGCT GGACCTCGAC
GTCGCCAAAG ACAGCGTCGG CGAACAGACC GACGCTGGGC CTGCGATCAA CACCAAACAC
GTGCAAACGC GCGTCGAAGT CGAGGATGGT GGTACGGTGT CGATCGGCGG CATTTACGCG
ACCGACGACC GGGACGATGT GACGCAGGTG CCGCTCCTGG GCAAAATACC GGTTTTGGGC
GCGCTTTTCC GCCATCGGGC TCATCGCGAC CGGCGCAGCG AGCTGGCCGT GTTCATCACG
CCGCGCGTCG TTCAGACAAA TTAG
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| Protein sequence | MRLAKPFPVG LLGVGAGVSP GLKICLALCV SAALAVGGAS ASTPPLPPLP AGMPLDGAVM
PADPPYSAPS LPREVTADVP NPFRQDSADD PDASPASATA ADAAADGPAT DVNAATAADG
SAPLRRQSAA AARDNAAGSS ALEGPPVPLP PLARLSGAPL SAADAGLAPD DKPLSLNFQR
AELGAVLNAF ARFTGLNIVA SERVRGAVSL RLDKVPWRTA FDTLLDVNGL AMERHGNVIW
VAPIADLAAR ERQRFEAHAR AADLEPLASR TFELHYAHAE DVRRLLTGSG AQRVLSKRGA
ATADPRTNLL FVTDLEARLA QIAALLTSVD RPTRQVLIEA RIVEGEHGFS RNLGVKLSMA
TSNADGSAKG LTDAAYDLSA RPIAGFDAAT AGLTLFAAGA TRLLNIELSA LEAQGRGEIV
SSPRVVTADR MKAVVEQGTE LPYQAKVGQG VSGVQFRRAT LKLEVEPQIM PDGRVVLDLD
VAKDSVGEQT DAGPAINTKH VQTRVEVEDG GTVSIGGIYA TDDRDDVTQV PLLGKIPVLG
ALFRHRAHRD RRSELAVFIT PRVVQTN
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