Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_A0351 |
Symbol | |
ID | 4006067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007951 |
Strand | + |
Start bp | 4487730 |
End bp | 4488992 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637949286 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_560634 |
Protein GI | 91785428 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0103305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGAT CCGCATTTGA CTACGTCGAC GGCGTGCTGC ATGCCGAAGG CGTATCCGCC GTTTCCCTCG CCGAGCAGTT CGGCACGCCG CTGTACGTGT ATTCGCGCGC CGCGCTCACC GCGGCGTGGA ACGCTTACGC CGGCGCTTGT GCCGGCCGCC GCGCAAGCGT GCACGTCGCC GTCAAGGCCA ATAGCAACCT CGCGGTGCTG AATGTGTTCG CGCGCCTCGG CGCCGGCTTC GACATCGTGT CCGGCGGCGA ACTGGCACGC GTGCTGGCCG CTGGCGGCAA AGCGGAAAAC ACGGTGTTTT CCGGCGTCGG CAAGAACGCG AACGAAATGC GCGAGGCGCT CGCCGCCGGC GTGAAATGCT TCAACGTCGA ATCGATTCCC GAGCTCGACC GCCTGAATGC GGTCGCGGCG GAAATGGGCA AGAAGGCGCC CGTCTCGCTG CGCGTGAATC CCGACGTCGA CGCAAAGACG CATCCGTATA TCTCCACCGG CCTCAAGTCG AACAAGTTCG GCGTCGCATT CGAAGACGCG CGCGCCACGT ATCAGGCGGC CGCGGGCATG GCGAATCTCG AAGTGGTGGG TATCGACTGC CATATCGGCT CGCAGATCAC CGAAGCCGCC CCGTATCTGG ACGCGGTCGA CAAGGTGCTG GAACTGGTCG AACAGATCGA GCAGGACGGC CTGAAGATTC GCCACATCGA CGTAGGCGGC GGCCTCGGCA TCACGTACGA CGACGAAACG CCGCCGGAGA TCGGCGAGTT CGTGCGCACC GTGCTCGATC GCATCGAAGC GCGCGGTCAC GGCCATCGTG AAGTGTATTT CGAGCCGGGC CGCTCGCTGG TCGGCAATGC AGGCGTGCTG CTTACGCGCG TCGAATTTCT GAAGCCGGGC GCGGAAAAGA ATTTCGCCAT CGTCGACGCG GCCATGAACG ATCTCGCGCG CCCCGCCATG TATGAGGCGT ATCACGCAAT CGATCCCGTC GTGAAGCGCG ACGTGCCGGC CCACGTGTAC GACGTGGTCG GTCCGGTTTG CGAGAGCGGC GACTGGCTCG GCCGCGAACG CCTGCTGGCG GTGGAACCGG GCGATCTGCT GGCAATCCGC TCGGCCGGCG CGTACGGCTT CGTGATGAGC TCCAACTACA ACACCCGTCC GCGTGCGGCC GAGGTGATGG TTGATGGTAC ACAAGTGCAT GTGGCACGCG CCCGCGAAGA GGTCAGGCAA CTGTTTGTGG GCGAAACGAT TTTGCCAGCG TAA
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Protein sequence | MTRSAFDYVD GVLHAEGVSA VSLAEQFGTP LYVYSRAALT AAWNAYAGAC AGRRASVHVA VKANSNLAVL NVFARLGAGF DIVSGGELAR VLAAGGKAEN TVFSGVGKNA NEMREALAAG VKCFNVESIP ELDRLNAVAA EMGKKAPVSL RVNPDVDAKT HPYISTGLKS NKFGVAFEDA RATYQAAAGM ANLEVVGIDC HIGSQITEAA PYLDAVDKVL ELVEQIEQDG LKIRHIDVGG GLGITYDDET PPEIGEFVRT VLDRIEARGH GHREVYFEPG RSLVGNAGVL LTRVEFLKPG AEKNFAIVDA AMNDLARPAM YEAYHAIDPV VKRDVPAHVY DVVGPVCESG DWLGRERLLA VEPGDLLAIR SAGAYGFVMS SNYNTRPRAA EVMVDGTQVH VARAREEVRQ LFVGETILPA
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