| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0340 |
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| Symbol | |
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| ID | 4006078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4500616 |
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| End bp | 4501593 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637949297 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_560645 |
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| Protein GI | 91785439 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.547825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0248679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCA GTTTGTTGAA GCCCAAGATC ATCGCAGTTG AATCGCTTGG TGAGAGCCAC
GCGAAAGTGG TCATGGAACC GTTTGAACGC GGTTACGGCC ACACCTTGGG TAACGCGCTC
CGGCGCGTAC TGCTGTCGTC GATGATCGGC TACGCGCCGA CCGAAGTGAC GATCGCAGGC
GTCGTGCATG AGTATTCGAC GCTCGACGGT GTGCAAGAGG ATGTGGTCAA CCTGTTGTTG
AACCTGAAGG GCGTGGTGTT CAAGCTGCAT AACCGTGACG AAGTGACGGT TACGCTGCGC
AAGGAAGGCG AAGGCGTTGT CACCGCTGGC GACATCGAAC TCGCACACGA TTGCGAAGTG
ATCAACCCGG ATCACGTGAT CGCGCATCTG TCGAAGGGCG GCAAGCTCGA CGTGCAGATC
AAGGTGGAGA AGGGCCGCGG CTATGTGCCG GGCAATGTGC GTCGTTATGG CGAAGAGTCG
GCCAAGATCA TCGGCCGTAT CGTGCTGGAT GCGTCGTTCT CGCCGGTTCG CCGCGTGAGC
TACGCCGTTG AAAGCGCTCG CGTCGAACAG CGTACCGACC TCGACAAGCT CGTGATGAAC
ATCGAAACCA ACGGTGTGAT TTCGCCGGAA GAAGCGATCC GTCAGTCGGC GCGCATTCTG
GTCGATCAAC TGTCGGTCTT CGCTGCTCTG GAAGGCACCG AAGCAACGGC TGAAGCGCCG
TCGCGTGCGC CGCAGATCGA TCCGATCCTG CTGCGTCCGG TTGATGATCT CGAACTGACG
GTTCGTTCCG CGAACTGCCT GAAGGCCGAG AACATTTACT ACATCGGCGA CCTGATCCAG
CGCACGGAAA ACGAGCTGCT CAAGACGCCG AATCTGGGCC GCAAGTCACT GAACGAAATC
AAGGAAGTAC TGGCGTCGCG TGGTTTGACG CTCGGCATGA AACTCGAGAA CTGGCCGCCG
GCTGGGTTGG ACAAGTAA
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| Protein sequence | MQTSLLKPKI IAVESLGESH AKVVMEPFER GYGHTLGNAL RRVLLSSMIG YAPTEVTIAG
VVHEYSTLDG VQEDVVNLLL NLKGVVFKLH NRDEVTVTLR KEGEGVVTAG DIELAHDCEV
INPDHVIAHL SKGGKLDVQI KVEKGRGYVP GNVRRYGEES AKIIGRIVLD ASFSPVRRVS
YAVESARVEQ RTDLDKLVMN IETNGVISPE EAIRQSARIL VDQLSVFAAL EGTEATAEAP
SRAPQIDPIL LRPVDDLELT VRSANCLKAE NIYYIGDLIQ RTENELLKTP NLGRKSLNEI
KEVLASRGLT LGMKLENWPP AGLDK
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