| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0334 |
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| Symbol | secY |
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| ID | 4006084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4503693 |
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| End bp | 4505039 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637949303 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_560651 |
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| Protein GI | 91785445 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0507904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00438746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGGCTAACA GCCCGAGTCT CGCAAAACCC GGTCGCAGCG CGGCGAAGTT CGGCGATCTG
CGTCGGCGTG CAGTGTTCCT GCTGCTGGCG TTGATCGTCT ATCGCATCGG CGCGCATATT
CCGGTGCCGG GTATCGACCC GGACCAGCTG GCAAAGTTGT TCCAAAGCCA GTCGGGCGGC
ATCCTTGGCA TGTTCAACAT GTTTTCGGGT GGCGCACTTT CGCGGTTCAC GATTTTCGCG
CTGGGGATCA TGCCGTATAT TTCGGCGTCG ATCATCATGC AGTTGCTGGC AATTGTCTCG
CCGCAGCTCG AAGCGCTTAA AAAAGAAGGG CAGGCGGGGC AGCGCAAGAT CACGCAGTAC
ACGCGTATCT TTACGGTCCT GTTGGCGACG TTCCAGGCGT TCGGCATTGC CGTCGCGTTG
GAAAATCAGC CGGGCCTGGT GATTGATCCG GGGATGGTTT TTCGGTTGAC GACGGTCGTG
ACGCTGGTGA CCGGCACGAT GTTCCTGATG TGGCTGGGTG AGCAGATCAC GGAGCGTGGG
CTTGGTAACG GTATTTCGAT CATTATTTTC GGCGGGATTG CAGCGGGTTT CCCGAATGCG
ATTGGCGGAC TTGTTTCGCT GGTGCAAACC GGCTCGATGA GCCCGATATC CGCGATTATC
GTCGTCGCAC TGATTGCTGC TGTGACGTAT CTGGTGGTGT TCATCGAACG CGGCCAGCGC
AAGATTCTTG TGAACTACGC GAAGCGGCAA GTCGGTAACA AGATTTACGG TGGACAGTCT
TCGCATCTGC CGTTGAAGTT GAACATGTCG GGCGTGATTC CGCCGATCTT TGCGTCGTCG
ATCATTCTCT TCCCGGCAAC CATCCTGAAC TGGTTTAGTT CGGGATCGCG TACCGGTTGG
TTCGCAGACA CGTTGCACAA CGTAGCCGAA GCCCTTAAGC CCGGTCAACC CGTGTACGTG
TTGCTGTACG CGTTGGCGAT CGTTTTCTTC TGCTTCTTCT ACACCGCGCT GGTGTTCAAC
AGCAGAGAGA CGGCCGACAA CCTGAAAAAG AGTGGCGCTT TCGTCCCAGG TATTCGCCCG
GGCGATCAAA CGGCGCGATA CATCGACCGC ATCCTGACGC GTTTGACGCT GGCCGGTGCG
ATCTACATCG TGTTTGTTTG TCTGCTGCCC GAGTTTCTGG TGCTGCGCTG GAACGTACCG
TTTTATTTTG GTGGAACGTC GCTGCTGATC ATTGTCGTCG TCACAATGGA TTTCATGGCA
CAGGTGCAGT CGTACGTTAT GTCGCAACAG TATGAATCGC TGCTGAAGAA AGCTAATTTC
AAAGGCGGCG GCGTCCCGAT GCGTTGA
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| Protein sequence | MANSPSLAKP GRSAAKFGDL RRRAVFLLLA LIVYRIGAHI PVPGIDPDQL AKLFQSQSGG
ILGMFNMFSG GALSRFTIFA LGIMPYISAS IIMQLLAIVS PQLEALKKEG QAGQRKITQY
TRIFTVLLAT FQAFGIAVAL ENQPGLVIDP GMVFRLTTVV TLVTGTMFLM WLGEQITERG
LGNGISIIIF GGIAAGFPNA IGGLVSLVQT GSMSPISAII VVALIAAVTY LVVFIERGQR
KILVNYAKRQ VGNKIYGGQS SHLPLKLNMS GVIPPIFASS IILFPATILN WFSSGSRTGW
FADTLHNVAE ALKPGQPVYV LLYALAIVFF CFFYTALVFN SRETADNLKK SGAFVPGIRP
GDQTARYIDR ILTRLTLAGA IYIVFVCLLP EFLVLRWNVP FYFGGTSLLI IVVVTMDFMA
QVQSYVMSQQ YESLLKKANF KGGGVPMR
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