| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0313 |
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| Symbol | rpsJ |
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| ID | 4006105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4514430 |
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| End bp | 4514741 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637949324 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_560672 |
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| Protein GI | 91785466 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000000233009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0207604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACC AGAAAATCCG CATTCGCCTG AAGGCTTTCG ACTATCGCCT GATCGATCAA
TCGGCTGCTG AAATCGTCGA CACGGCAAAG CGGACTGGCG CAATCGTTCG TGGTCCGGTT
CCGCTGCCGA CCCGCATTCA ACGCTTCGAC ATCCTGCGTT CGCCGCACGT CAACAAGACG
TCGCGCGATC AGCTCGAAAT CCGTACGCAC CAACGCCTGA TGGACATCGT CGATCCGACG
GACAAGACCG TTGACGCACT GATGAAGCTG GACCTGCCGG CTGGCGTGGA CGTGGAAATC
AAGCTGCAAT AA
|
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| Protein sequence | MQNQKIRIRL KAFDYRLIDQ SAAEIVDTAK RTGAIVRGPV PLPTRIQRFD ILRSPHVNKT
SRDQLEIRTH QRLMDIVDPT DKTVDALMKL DLPAGVDVEI KLQ
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