| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0296 |
|---|
| Symbol | |
|---|
| ID | 4006131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 4542917 |
|---|
| End bp | 4544539 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637949350 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_560689 |
|---|
| Protein GI | 91785483 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.137414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACGTC TCAGCGAAAT CAAACTCCCG CTCGATCACC CCGAGAGCGC CCTCGAAGCC
GCCGTGCGTG CGCGTCTCGC GGAACTTGGC GTGGCCGCGG ACGGGCTTAT CCAATACACC
GTGTTTCGCC GCGCGCACGA CGCCCGCAAG CGCGCCGACA TCAAGCTCAC GTATATAGTC
GATGTCGAAG TTGCGGATGA AGCGGCGGCG CTCAAGCGGC TCGCCGACGT GCCCCACTGC
GGCGTCACGC CCGACATGGC CTACAAGTTC GTCGCGAGAG CGCCGGCGCA GATGACCGCG
CCCCGTCCGG TCGTGATCGG CATGGGGCCG TGCGGCCTGT TTGCCGGGCT GATCCTTGCG
CAAATGGGCT TCCGGCCGAT CATCCTGGAA CGTGGCAAGG CGGTGCGCGA GCGCACCAAG
GACACTTTCG GCCTGTGGCG CAAGTCGGTG CTCAATCCCG AGTCGAACGT GCAGTTCGGC
GAAGGCGGCG CTGGTACCTT CTCGGACGGC AAGCTGTACA GCCAGATCAA GGATCCGAAG
CACTACGGCC GCAAGGTGCT CGACGAATTC GTGCGGGCCG GTGCGCCGGA AGACATTCTG
TATCTGAGCC GGCCCCATAT CGGCACGTTC CGGCTCGTCA GCATGGTCGA AAAAATGCGC
GCGACCATTC ACGAACTGGG TGGCGAGGTG CGCTTCGAAA CCCGCGTCGA CGATATCGAG
ATCGATCAGG GCAAGGTGCG CGGGTTGAAG CTCTCGACCG GTGAAACGCT GCGCTGCGAT
CACGTGGTGC TGGCGGTCGG ACATAGCGCG CGCGATACCT TCCAGATGCT GAACGACCGC
GGCGTCTATA TCGAGGCGAA GCCGTTTTCA CTCGGTTTTC GCATCGAACA TCCGCAGGGT
TTGATCGATC GCAGCCGTTT CGGCAAATTT GCCGGCCACA AGCAGTTGGG TGCCGCCGAC
TATAAGGTGG TGCATCACTG CAGCAATGGC CGCACTGTTT ACAGCTTCTG CATGTGCCCC
GGGGGCACGG TGGTGGCGGC GACTTCCGAG CCGGGCCGGG TGGTGACCAA CGGCATGAGC
CAGTATTCGC GGGCAGAGCG CAATGCCAAT GCCGGGATCG TGGTCGGCAT CACGCCTGAC
GATTATCCGG GCGGGCCGCT CGCGGGCATC GCCTTCCAGC GCAAATGGGA AGAGCGGGCT
TTCGAACTCG GCGGCGGCAA TTATATGGCG CCGGGTCAGC TGGTAGGCGA TTTCATTGCC
GGCCGGCCGT CCACGTCGCT GGGTTCCGTC GTGCCGTCGT ATAAGCCCGG CGTGCATCCA
ACGGACCTTA GCACTGCGCT TCCGGACTAT GTGATCGAGG CCATTCGCGA AGCTTTGCCG
CAGATGGACA AGAAGATCGC CGGTTTTGCG ATGCACGACG CGGTGCTGAC GGGCGTCGAA
ACGAGAACGT CGTCGCCGAT TCGTGTGCGG CGCCGGGACG ACTACCAGAG CATGAATGTC
GAAGGTCTGT ATCCGGCCGG CGAAGGAGCG GGCTATGCCG GTGGAATCTA CTCAGCGGCT
ATCGACGGGA TCGAAGTTGC TGAAGCGCTC GCGTTGAAGA TGACCGGCGC GCAAGCGGCC
TGA
|
|---|
| Protein sequence | MLRLSEIKLP LDHPESALEA AVRARLAELG VAADGLIQYT VFRRAHDARK RADIKLTYIV
DVEVADEAAA LKRLADVPHC GVTPDMAYKF VARAPAQMTA PRPVVIGMGP CGLFAGLILA
QMGFRPIILE RGKAVRERTK DTFGLWRKSV LNPESNVQFG EGGAGTFSDG KLYSQIKDPK
HYGRKVLDEF VRAGAPEDIL YLSRPHIGTF RLVSMVEKMR ATIHELGGEV RFETRVDDIE
IDQGKVRGLK LSTGETLRCD HVVLAVGHSA RDTFQMLNDR GVYIEAKPFS LGFRIEHPQG
LIDRSRFGKF AGHKQLGAAD YKVVHHCSNG RTVYSFCMCP GGTVVAATSE PGRVVTNGMS
QYSRAERNAN AGIVVGITPD DYPGGPLAGI AFQRKWEERA FELGGGNYMA PGQLVGDFIA
GRPSTSLGSV VPSYKPGVHP TDLSTALPDY VIEAIREALP QMDKKIAGFA MHDAVLTGVE
TRTSSPIRVR RRDDYQSMNV EGLYPAGEGA GYAGGIYSAA IDGIEVAEAL ALKMTGAQAA
|
|---|
| |