| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0190 |
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| Symbol | |
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| ID | 4006237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 4642668 |
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| End bp | 4644473 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637949454 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_560793 |
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| Protein GI | 91785587 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase
[COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATC AATCCCAGCC TGAGCGCACG CACGCCGCCC CGCCGCACAC CGCCTATCTC
ACCGCATTGA TCGACGCCGC GCTCGAAGCG CACCAGGCCG GTCGGCTCGA CGCCGCCGAA
TCGTTTTACC GCGAGGCGCT CACGCTCGAC AGCGCCCATA CGGGCGCACT GCACTACTTC
GGCGTGCTGC ATTATCAGCG CGGCGCTCAC GACATCGCCG CCAGCCTGAT GAGCCGCGCG
CTCAAACTCG ATCGTCACGA TGCCGCCTGC TGGAGCAACC GCGGGCTCGT GGCCGCCGCG
CTCGGCCATC TCGACGAAGC AATGATCTGC TACGACCAGG CACTGCAACT CCAGCCCGAT
TTCGCCGACG CGCACAACAA CTTCGGCGCC GCGTTACAAG CGCAAGGCGC GTTGCCGGAA
GCGGTCGAAC ACTACCGCCT GGCGCTGGCT TCCAACCCCA TGCTGCTCGA CGCGCATCTG
AACCTGGGCA CGGCGCTGAA CAAGCTCGCG CGTTTCGACG AAGCGCTGGC GTGCTATCGC
CATGTTCTGT CGCTCGATCC CGCCTCGGCG GAGGCGCACT TCAGCGCGGG TAATACCTAC
CAGGCGCGCG GCGACCACGG CGCGGCGATC GCCAGCTTCG AGCAGGCCGT GGCACTGCGT
GCGGATTACG CGGAGGCGCA CGTCAACCTG GGCAGCCTGA TCGGCAAGCT CGGCGACTAT
GCGGGCGCCG AATCGCACTA CCGGCGCGCG GTCGCGCTCA AACCGGTTCC GACTCATCTC
GTGTGTCTGG GCGGATCGCT CGGTGCGCAA GGGCGCCTCG ACGAAGAAGA AGGCTTCTAT
CGCCAGGCGC TCGCGCTCGA CCCGCACCAT GCGGACGCCC ATCAGAATCT GGCGTGGCTG
TTGCTCAAGC GCGGCGACTA CAAACAGGGC TGGGCGGAAT TCGCGCTGCG CTGGCGCAAG
ACCGACTACG AAGCGATCGC GGTGCCGGGC GTGCCGGAGT GGCGTGGCGA GCCGCTCGAA
GGGCGCCGTC TGCTGCTGGT CGGCGAGCAG GGTTTTGGCG ACCACTTCCA GTTTCTGCGC
TTTGCAAGCG TGCTCGCCCA ACGCGGCGCA ACCGTCGACC TCTGCGTGCG CGAACCGCTG
TTGCCTTTGG TCGAACGCGT GGCGGGTGTG CGTCGCGCGT ATAGCGGCAA GCCCGATGGC
GAATACGATT TCTGGGTGCC GATGATGAGC ATCCCATCCT GCCTCGGCCT GGAGCTTTCC
ACCATTCCCG CGGACGTGCC CTATCTGTCC GCCGACAAGG CAAAGATCAA GGCATGGCGC
AAGCGGCTCG GCGCGGCCGA CAAATCGGCG CGCAAGGTGG GGCTCGTCTG GGCCGGCAGC
CCGACATTCG GCAACGACCG TTACCGGTCG ATCCCGCTGT CCGACCTGAG CGCGCTCCGC
GGCTTAAAGA ACGTGGCCTG GTACGCGCTG CAAAAAGGCC CGGCGCATGC GCAACTGGCC
GCTGCGCCGC CGGCTTTCAG CGCACACGAT TTCACCGCCG GGCTGAACGA TTTCGAAGAC
ACGGCGGCGT TGATCATGAA TCTCGATCTG GTGATCGCGG TGGACACCGG CGTTGCGCAT
CTGGCGGGGG CGTTGGGCAA GCCAGTATGG TTACTGTTGC CCGCCAATTC CGACTGGCGC
TGGCTGGAAG CGCGCAGCGA CTCGCCGTGG TATCCAGGAA TGAGGCTGTT CCGGCAGGCG
GTGTTAGGGG ATTGGGTGCC GGTGGTTGAC GAAGTGGCCA AGGCACTGCA CGACGGCGCC
CATTGA
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| Protein sequence | MEHQSQPERT HAAPPHTAYL TALIDAALEA HQAGRLDAAE SFYREALTLD SAHTGALHYF
GVLHYQRGAH DIAASLMSRA LKLDRHDAAC WSNRGLVAAA LGHLDEAMIC YDQALQLQPD
FADAHNNFGA ALQAQGALPE AVEHYRLALA SNPMLLDAHL NLGTALNKLA RFDEALACYR
HVLSLDPASA EAHFSAGNTY QARGDHGAAI ASFEQAVALR ADYAEAHVNL GSLIGKLGDY
AGAESHYRRA VALKPVPTHL VCLGGSLGAQ GRLDEEEGFY RQALALDPHH ADAHQNLAWL
LLKRGDYKQG WAEFALRWRK TDYEAIAVPG VPEWRGEPLE GRRLLLVGEQ GFGDHFQFLR
FASVLAQRGA TVDLCVREPL LPLVERVAGV RRAYSGKPDG EYDFWVPMMS IPSCLGLELS
TIPADVPYLS ADKAKIKAWR KRLGAADKSA RKVGLVWAGS PTFGNDRYRS IPLSDLSALR
GLKNVAWYAL QKGPAHAQLA AAPPAFSAHD FTAGLNDFED TAALIMNLDL VIAVDTGVAH
LAGALGKPVW LLLPANSDWR WLEARSDSPW YPGMRLFRQA VLGDWVPVVD EVAKALHDGA
H
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