| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0051 |
|---|
| Symbol | |
|---|
| ID | 4006376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 4787687 |
|---|
| End bp | 4789411 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637949590 |
|---|
| Product | thiamine pyrophosphate protein |
|---|
| Protein accession | YP_560928 |
|---|
| Protein GI | 91785722 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAGC CGAATGCTCC CGTTTCTGTT TCCGGCTCCG CCGCCGCTCA AACCACCGGC
GCGCGTCTCG TCGTCGATGC TTTGCTGACG CACGGTGTCG AGCGTGTTTT CTGTGTGCCG
GGCGAAAGTT TTCTCGCCGT GCTCGATTCG CTGCACGATG AAACCGAACG CATCCAGACC
ATCGTTTGTC GTCATGAAGC GGCTGCGGCG AATATGGCGG AAGCCGTCGG CAAATTGACC
GGCCGGCCAG GCGTGGCGAT CGTCACACGC GGACCGGGTG CCACGCATGC GTCGATCGGC
GTACACACCG CGTTTCAGGA TTCCACGCCG ATGATTTTGC TGATCGGCCA ATGCGCACGC
GAGCATCTCG ACCGCGAGGC TTTCCAGGAA ATCGACTACC GGCGCATGTT CGGTCAGATG
GCGAAGTGGG TCGCGCAGAT CGACGATCCC AAACGCATTC CCGAATATCT GAGCCACGCG
TTTCACACGG CGACATCCGG ACGGCCTGGA CCCGTCGTGC TGTCGTTGCC GGAAGACGTG
TTGAGCGACG CGTGCAACGC CGTGGCCGGC GCGCCCGCGT ATCAGCGCGT CGCGGCGTCG
CCTTCGACGG CGCAGATCGA GAAGTTGCGC GGGTTGCTCG AAGGCGCGCA ACGGCCAATG
GTGATCGCGG GCGGCAGCGG CTGGACGCCT GCTGCGTGCG CGGACTTTCA ACGCTTCGTC
GAGAACTGGC AACTGCCGGT TGGCCTCGCG TTCCGCTTTC AGGACACGCT CGACAACGAG
CATCCGAACT ATGCCGGCGA CGTCGGCCTT GGTATCAATC CGGCGCTGAC GCAACGTATC
CGCGAAGCCG ACCTGTTGCT CGCAATCGGG CCTCGCCTGG GCGAAGCGAC CACCAACGGC
TATACGCTGC TCGACATCCC GAAAACGAAG CAGACGCTCG TGCATGTGCA TCAAGGCGCG
GAGGAATTGG GACGCGTGTA TGCGGCGGAT CTGCCGATCG TCTCCGGTAT GCCAGAACTG
GCGGCAATGC TTGCGGAGTT GGAGCCTTCG TCCGAGCAAC TTGCCTGGTC TGGGGCCGCG
AGCGAGGCGC ATCGCGCGTA TCTCGACTGG CGCAAACCGC GTCGCATTCC GGGCGACGTG
CAGATGGGCG AAGTGATCCA GCAGTTGCGC GCGCACCTAC CGGATGACGC GATTCTCACC
AACGGCGCGG GTAATTATGC GACGTGGCTG CATCGGCACT TCTCCTATCG CCATTACCGT
TCGCAACTCG CGCCGACGAG CGGCGCGATG GGTTATGGCG TGCCGGCGGC GATCGCGGCG
AAGTCGATGT ATCCGCAACG CGCGGTCGTG GCGCTGGCCG GCGACGGCTG CTTCATGATG
TCTGCGCAAG AACTCGCGAC GGCGATGCAG TACGACCTGC ACGTGCTATT CATCGTGCTG
AATAACAGCC AGTTCGGGAC GATCCGGATG CATCAGGAGC GGCATTATCC GGACCGCGTG
CACGGCACCG GACTCACGAA TCCGGACTTC GCGGCGTTCG CGCGTTCGTT CGGCGCGCAT
GGTGAGACGG TGGAGCGGAC CGAGGATTTT CTGCCTGCGC TGAAGCGTTC GATCGAGGCG
AAGCGTGCGG CGGTGATCGA GATCCGCATG CCGCAGGAAG CGAGCACGCC GGGGGCGACG
CTGGAACAGA TTCGCGAGCA GGGGAGGAAG ATGCGCGGGG AGTAA
|
|---|
| Protein sequence | MSQPNAPVSV SGSAAAQTTG ARLVVDALLT HGVERVFCVP GESFLAVLDS LHDETERIQT
IVCRHEAAAA NMAEAVGKLT GRPGVAIVTR GPGATHASIG VHTAFQDSTP MILLIGQCAR
EHLDREAFQE IDYRRMFGQM AKWVAQIDDP KRIPEYLSHA FHTATSGRPG PVVLSLPEDV
LSDACNAVAG APAYQRVAAS PSTAQIEKLR GLLEGAQRPM VIAGGSGWTP AACADFQRFV
ENWQLPVGLA FRFQDTLDNE HPNYAGDVGL GINPALTQRI READLLLAIG PRLGEATTNG
YTLLDIPKTK QTLVHVHQGA EELGRVYAAD LPIVSGMPEL AAMLAELEPS SEQLAWSGAA
SEAHRAYLDW RKPRRIPGDV QMGEVIQQLR AHLPDDAILT NGAGNYATWL HRHFSYRHYR
SQLAPTSGAM GYGVPAAIAA KSMYPQRAVV ALAGDGCFMM SAQELATAMQ YDLHVLFIVL
NNSQFGTIRM HQERHYPDRV HGTGLTNPDF AAFARSFGAH GETVERTEDF LPALKRSIEA
KRAAVIEIRM PQEASTPGAT LEQIREQGRK MRGE
|
|---|
| |