Gene Bxe_A0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A0023 
Symbol 
ID4006404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp4823348 
End bp4824514 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content63% 
IMG OID637949618 
Productbranched chain amino acid ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_560956 
Protein GI91785750 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGG CATTGCGTTG GATCAGCGCG GCACTGGTCG CCACTGGAGT CACCGCGGCA 
TGGAGCAGCC ATGCTTTCGC GGACGTGAAA ATCGGCGTGA CCGTGTCGGC AACGGGTCCT
GCCGCGTCGC TCGGTATACC GGAAAAGAAC ACGATTGCGC TGCTGCCTAA AGAAGTGGCA
GGCCAGAAAA TCGAGTACAT CATGCTCGAC GACGCCACCG ACTCGACTCA GGCCGTCAAG
AACACGCGCA AGCTCACCAG CGAAGATCAC GTGGATGCGC TGATCGGCTC GACCGTGGTG
CCGAACTCGC TGGCCATGAT CGATGTCGCC GCCGAAACCA CCACGCCCAT GATCTCGATG
GCCGCTGCGG CGAGCATCGT CGAACCGATG GATGCGAAGC GCGCGTGGGT CTTCAAGACG
CCGCAGAACG ACATTCTCAT GGCCACCGCG ATCGCGCAGC ATATGTCGAA TCACGGCGTG
AAAACGGTCG CCTTTATCGG CTTCTCGGAC GCTTACGGCG AGAGCTGGTT CAAGGAATTC
AGCAAGGCCG CGGACCTCGC GAAGATCAGG ATCGTCGCGA ACGAACGCTT CGCGCGTAAC
GACGCGTCGG TGACCGGCCA GGTGCTGAAA GTCATGTCGC GGAATCCGGA TGCGGTGCTG
ATCGCGGGCG CGGGCACACC GGCTGCGCTG CCGCAGAAAA CGCTCAAGGA GCGCGGCTAC
AAGGGCAAGT ACTATCAGAC GCACGGCGTC GCCAATAACG ATTTCCTGCG CGTGTGCGGC
AAGGATTGCG AAGGGACTTA TCTGCCGGCC GGCCCGCTGC TCGTTGCCGA TCAACTGCCC
GATTCGAGTC CGGTGAAAAA GAGCGCGCTC GCCTATAAGC GTGCGTATGA AACCGCTTAC
GGTGTCGGCT CGGTGTCGAC CTTCGGCGGG CATGCGTGGG ACGCGGGCCT GCTGCTGCAA
CGCGCGATTC CGCTGGCGCT GAAGAAGGGC CAGCCGGGCA CGCCCGCGTT CCGCGAGGCG
CTGCGTGCAG CGCTGGAAAA CACCAAAGAC ATGCCCGCGT CGCACGGCAT CTTCAACATG
AGCGCGAACG ACCATTCCGG TCTCGACCAG CGGGCGCGCG TCATGGTGGA GATTGTCGGC
GGCAAGTGGA AGTTGTCCGG CGACTGA
 
Protein sequence
MKSALRWISA ALVATGVTAA WSSHAFADVK IGVTVSATGP AASLGIPEKN TIALLPKEVA 
GQKIEYIMLD DATDSTQAVK NTRKLTSEDH VDALIGSTVV PNSLAMIDVA AETTTPMISM
AAAASIVEPM DAKRAWVFKT PQNDILMATA IAQHMSNHGV KTVAFIGFSD AYGESWFKEF
SKAADLAKIR IVANERFARN DASVTGQVLK VMSRNPDAVL IAGAGTPAAL PQKTLKERGY
KGKYYQTHGV ANNDFLRVCG KDCEGTYLPA GPLLVADQLP DSSPVKKSAL AYKRAYETAY
GVGSVSTFGG HAWDAGLLLQ RAIPLALKKG QPGTPAFREA LRAALENTKD MPASHGIFNM
SANDHSGLDQ RARVMVEIVG GKWKLSGD