Gene Bxe_A0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A0020 
Symbol 
ID4006407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp4826018 
End bp4826902 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content62% 
IMG OID637949621 
Productbranched chain amino acid ABC transporter inner membrane protein 
Protein accessionYP_560959 
Protein GI91785753 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCT TTGGCGTTCC GCTACCGGCG ATGCTCAGCC AGCTGTTGCT GGGGCTCGTG 
AACGGCTCGT TCTACGCAAT TCTGAGTCTC GGGCTGGCGG TGATCTTCGG CTTGCTCAAT
GTGATCAACT TTGCGCACGG TGCGTTGTTC ATGCTCGGCG CGATGCTCGC GTGGATGGGG
CTGTCGTATT TCGGCTTGCC GTACTGGGTG ATGCTCGTGC TGGCGCCGTT GATCGTGGGG
CTGTTCGGCA TGGCGATCGA ACGCTCGATG CTGCGCTGGC TCTACAAGCT CGACCATCTG
TATGGCCTGT TGCTGACCTT CGGACTCACG CTGGTGGTGG AGGGCGTGTT CCGTTCCATC
TACGGTTCCT CTGGCCAGCC GTACGACGTG CCGTCGGCGC TTTCGGGCGC GACCAATCTC
GGCTTCATGT TCCTGCCGAA CTATCGCGCG TGGGTCGTGG TGGCCTCGCT GGTGGTGTGC
TTCGCGACGT GGTTCGTGAT CGAGAAGACG CGTCTTGGCG CATATCTGCG CGCCGGCACG
GAAAACCCGA AGCTGGTCGA AGCGTTCGGC ATCAACGTGC CGCTGATGAT CACGCTCACA
TACGGCTTCG GCGTCGCGCT GGCGGCATTT GCCGGTGTGC TCGCCGCTCC GGTGATCCAG
GTCTCGCCGC TGATGGGGCA GCCGATGATC ATCACCGTGT TCGCGGTGGT CGTGATCGGC
GGCATGGGGT CGATCATGGG CTCGATTCTC ACCGGCTTGA TGCTCGGCGT GATCGAGGGG
CTGACGCGCG TGTTTTACCC GGAAGCGTCG GCGACCGTCG TCTTCGTGAT CATGGCGCTC
GTGTTGCTGG TGCGCCCGGC GGGTCTCTTC GGCAAGGAAA AATGA
 
Protein sequence
MEIFGVPLPA MLSQLLLGLV NGSFYAILSL GLAVIFGLLN VINFAHGALF MLGAMLAWMG 
LSYFGLPYWV MLVLAPLIVG LFGMAIERSM LRWLYKLDHL YGLLLTFGLT LVVEGVFRSI
YGSSGQPYDV PSALSGATNL GFMFLPNYRA WVVVASLVVC FATWFVIEKT RLGAYLRAGT
ENPKLVEAFG INVPLMITLT YGFGVALAAF AGVLAAPVIQ VSPLMGQPMI ITVFAVVVIG
GMGSIMGSIL TGLMLGVIEG LTRVFYPEAS ATVVFVIMAL VLLVRPAGLF GKEK