| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5562 |
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| Symbol | |
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| ID | 4016521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | + |
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| Start bp | 325485 |
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| End bp | 326993 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637945177 |
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| Product | major facilitator transporter |
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| Protein accession | YP_552309 |
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| Protein GI | 91791359 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.449496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTC GTTCTTTCAC GTTAATCCGT GCAGTTGATG AATCCAGGCG CCCAAGCAAC
ACGGCAAAAC ACCCCTTGAG CACCCCTTCC ACCCTTGACG AAATGCAGGC GCACTACGGC
CCGCATTATC GCTGGCTCCT GCTGCTGTCG GTCATGGTGG GAACGATGGC GTCCATCATG
TCCTCGACCA TCGTCAACGT GGCCATTCCC GACTTAAGCC AGCACTTCGC GCTCGGCCAG
GACCGCGCCC AATGGGTCTC CTCCGGCTTT ATGGTGGCGA TGACGGCTTC CATGCTGACC
ACACCCTGGC TGCTGGCGCG TTACGGCTAC CGCCGCACTT ATGTGGACAC CATGGTCCTG
CTGCTGGCTG GCGGCATCGT TGGCGGATTC TCCAGCAGCT TCGCCCTGGT GCTGTCTGCA
CGCGTGGCCG AAGGGCTGGC GGCCGGCGTG GTACAGCCGA TTCCAGCCAT CATCATCATG
CGCGCCTTTG CACCGCACGA ACAAGGGCGA GCCAGCGGCA TCTTTGGCAT GGGCGTGGTG
CTGGCGCCCG CCATCGGACC CAGTATCGGC GGCGTGCTGG TCGATCTGTT TGGCTGGCGT
TCGATTTTTT TCATGGTCGT GCCCTTTTGC CTGGCCTCGC TGTGGCTGGC CTACCGCAAA
GGCGCGACGC TGGACTGGCG CGGCCTGCTG CTGGGCAGCG CCGGTACCTT GTGCCTGCTC
AACGGCATGG TGGCACTGCA CGGCGGCGCA CCGCTTGAAG CCGCCCTGCT GCTGGGCGCG
GCCGTACTGG CGCTGGTCGT TTTTATTGTC TGGCAGCGGC GCCTGGCCAA CACCGGCCGG
GAACCCTTGA TGAACCTGGC GCTGTTTGGC TACCGCCAGT TCGCCAGGGG CAGCATCGTC
GCCTTTATTT ACGGCACTGC GCTGTTTGGC TCGACCTACC TGCTGCCGGT TTACATGCAG
CTGGGGCTGG GTTTGTCAGC CTCGTATGTC GGCAGCATCT TGTTGCCGTC CGGTTTTGTG
CTGGCCGTCA CAATTGCGCT GGTTGGCCGT CTGGCCGACC GCCATCCCAC CTACCTGCTG
GTCAGCATCG GACTGGCCTT GCTGGCCCTG TCTTTTGCCC TGATGCTGAC GGTGACCCTG
AGCACCGGGA TAGGGGTATT GGTGGCCTGG GCCATATTGG GGCGCATCGG GCTCGGTTTC
ATTTTGCCTT CGCTCAACCT CGGCTCGCTG CGGGCGCTGG GCAAAAACCT GATTTCGCAG
GGCTCCAGCA CGATCAGTTT TGTGCGCATG CTGGGCGGCG CGATTGGCGT CAGCCTGTGC
GGCATCGTGC TCGAATGGCG GCTGAGCGCG CATGGTGATT CGCTGGCGCA AACTACCAGC
AGCCCGGCAC GGCTTGCGGC CTTCAACGAG TCTTTCATGC TGCTGGCGGC ACTGTGTGCG
CTGGCGCTGG CGGCAGCATG GCAGGTTCGC GACGCCCCTG CGGCTGCACC CGGCAGTCCA
AAAGGCTGA
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| Protein sequence | MKVRSFTLIR AVDESRRPSN TAKHPLSTPS TLDEMQAHYG PHYRWLLLLS VMVGTMASIM
SSTIVNVAIP DLSQHFALGQ DRAQWVSSGF MVAMTASMLT TPWLLARYGY RRTYVDTMVL
LLAGGIVGGF SSSFALVLSA RVAEGLAAGV VQPIPAIIIM RAFAPHEQGR ASGIFGMGVV
LAPAIGPSIG GVLVDLFGWR SIFFMVVPFC LASLWLAYRK GATLDWRGLL LGSAGTLCLL
NGMVALHGGA PLEAALLLGA AVLALVVFIV WQRRLANTGR EPLMNLALFG YRQFARGSIV
AFIYGTALFG STYLLPVYMQ LGLGLSASYV GSILLPSGFV LAVTIALVGR LADRHPTYLL
VSIGLALLAL SFALMLTVTL STGIGVLVAW AILGRIGLGF ILPSLNLGSL RALGKNLISQ
GSSTISFVRM LGGAIGVSLC GIVLEWRLSA HGDSLAQTTS SPARLAAFNE SFMLLAALCA
LALAAAWQVR DAPAAAPGSP KG
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