Gene Bpro_5550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5550 
Symbol 
ID4016509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007950 
Strand
Start bp309289 
End bp310365 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content64% 
IMG OID637945165 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_552297 
Protein GI91791347 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.088188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGTC TATTCTCAAA AACCACGCTG GGATCACTCC CGCTGCAAAA TCATCTGCTC 
ATGTCGCCGT TGACGCGCAA CCGCGCCACC GGCAACATCC CGAACGCGCT CATGGCGCAG
TATTACGCGC AGCGGGCCAC GGCGGGGCTC ATCATCAGCG AGGGCACCTC ACCGTCGCCC
AACGGACTGG GCTATCCGCG CATACCGGGC ATTTTTTCGG CCGAACAGAT AGCCGGCTGG
AAACAGATCA CCGATGCGGT GCATGCCCAG GGCGGCAAGA TGTTCATGCA GCTCATGCAC
TGCGGACGCA TCGCCCATCC GCTCAATCTG CCCCAGGGCG CACGCGTGCT GGGGCCGTCG
GCCGTGGCCG CCGCCGGTGA CATGTACACC GACGCCGAGG GCCTGAAACC GAACGCCCTG
CCGCAGGCGA TGACCGAGGC CGACATCAAA ACCGCCATCG AGGAGTTCGC CCAAGGCGCG
AAGAACGCGG TGGCGGCGGG ATTCGATGGC GTCGAGCTGC ACGGGGCGAA CGGTTATCTG
CTCGAACAGT TCATTCGCCC GAACTCGAAC CAGCGCACGG ACGGCTACGG CGGCGCCATC
GAGAACCGGG CGCGCTTCGT GCTCGAAGTC GCTGACGCCG TGATTGAAGC CATCGGCAAA
GACAAGGTCG GCATCCGTTT ATCGCCCTTC GGCGTGTTCA ACGACATGCC GCTGTACGAC
GCGATGCAAG CTGATTACAC CTGGCTGGCG CAGCAACTCA ACGCCCGCGG CGTGGTCTAC
ATCCACCTGG TCGATCACTC GGCCATGGGT GCACCCACCG TGCCGGACGC CATGAAAGCG
GCATTCCGCC AATTATTCAA GGGCACCCTG GTTCTCTCCG GCGGCTACGA CGCCGCATGC
GCCGAGGGCG ACCTGGTGGC AGGCAAGGCC GATCTGGTCG CCGTGGGCAG GCCTTTCCTG
GCCAACCCCG ATCTGATCGC ACGCTGGCAG GCGGGCGCGG CGGTGAATGC GCCGGACATG
AGCACGTTTT ACACGCCCGG TCCCGAAGGC TATACGGATT ACCCGACGCT GGCTTGA
 
Protein sequence
MSRLFSKTTL GSLPLQNHLL MSPLTRNRAT GNIPNALMAQ YYAQRATAGL IISEGTSPSP 
NGLGYPRIPG IFSAEQIAGW KQITDAVHAQ GGKMFMQLMH CGRIAHPLNL PQGARVLGPS
AVAAAGDMYT DAEGLKPNAL PQAMTEADIK TAIEEFAQGA KNAVAAGFDG VELHGANGYL
LEQFIRPNSN QRTDGYGGAI ENRARFVLEV ADAVIEAIGK DKVGIRLSPF GVFNDMPLYD
AMQADYTWLA QQLNARGVVY IHLVDHSAMG APTVPDAMKA AFRQLFKGTL VLSGGYDAAC
AEGDLVAGKA DLVAVGRPFL ANPDLIARWQ AGAAVNAPDM STFYTPGPEG YTDYPTLA