Gene Bpro_5548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5548 
Symbol 
ID4016507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007950 
Strand
Start bp306204 
End bp307787 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content60% 
IMG OID637945163 
Productphage integrase 
Protein accessionYP_552295 
Protein GI91791345 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.174978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.321363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGGGA CGGCTTTGCC AGCATCGTCT CAATTGTGGG TAGACCATGG CGTGGAGCCA 
GCACATGCGG TACCGACCAC CCCAGAACTT GCCGCCCAGT ACCTGGCCAA CGCACTGATG
CACCCGGTGT ACGAAAACTG GAATTGGCAG CGACTGATCA AGGTTTACGG GGCACTGCCG
CACGCTCGGC GCGCAAAGCC GCGGGTTTGC AAACTCCTGT TGAATGCCCC GGCAGTCGTG
GAGTATTGGC AAAAGGGCAA ACTGCATGTG GTGGCGGGGC CAGATGCGCC GGATCCGGCC
AGCATTGTTT TGGCGGTGCT CAAGTCGCAC AAAACGCGGT TTCGTTTGGT GACGGCGGGC
ATGCCGGCGA AGACCACCCA AACCAGCCCG AACGACAGCC AAGTTCCATT TGCATTCGCA
CTGCGCGCCT GGCTGCAAAG AACCGGCAGG CTCTATAACC CCCATGAACA CACCAACACC
TTGGGCGCCA GCGATGACTA TGCGGCGCTG TCAGCATTCT TGCGTGAGCG TACCAGCCGC
TCCAGGCACA CCTGGAGGGC GTACACGAAA GAGTTAGAAC GATTGGTCAC CTGGTGCCAA
GAGCAGAACC TGGGGCCGCT CTCAGATCTG ACGCGGCAGG ACTTGCTGAA ATACAAGTCG
CGCATGCAGA AAATGCAGTC TGGCAACAAA CCGCTCGAGG GGGATACGCC GGCACAGATG
CGGCCCATGG CAGAAAAGTC ACAGGCGCGC TCGCTCGCGG TCGTGGCGAG TCTTTACCGC
TACTGGCACA ACACCGGATA TTTACAGGGC AACCCCGCGG CAGGCCTTAC CGGTGGCTCC
AGGGCACAAG CCGGGTTTGC GCCAACGCGC ATGGTGAGTT CGGAGCTTTT GGCGCGGTGC
GATGCGTTTA TCGAGCGCAG CTTGCAGACG TCGCCGCCAT TACAAACAGC CGATGCCAAC
GTCTGGCGCC GCTGTGCAAT CTGGCATTTG TTCCGGTTTA GCGGGGCGCG GCTTGCCGAG
CTTGCCTGGA ATCCATCGAA GGCCTTGCCA CGCGTTGAGT CCGACAAAGT TGGCGCCGTC
ACCCTGACCG TGGTTGGCAA GGGCAACAAG ATTCGCCAAA TTCCATTGCC CACCATTTGC
TCCCATGTGC TGTTGAGCTA TCGACTGGCA AGAGGCCTGC CTGAACTGCC AGATACCCTT
GAACAGATAC CGCTCATCCA TGGGGAAAAG GCCGGGTACC TTGGCGCACG CGGACTCTAC
AACGAAGTCA AAGCAGTGCT GCTGGCGGTG GCCCGAGAAA TTGAGCAAGG CGATCCACAG
AGTGGCACGC TGCTGCGCAC CGTGTCGCCG CACTGGTTAC GCCATGCCTA TGCCAGAACG
CTGGTTGTGG ACAAACGTGT TCCACTGCCC GCCGCGCAGG CGCTACTTGG CCACGCATCG
GTACAGACTA CTGCCGCGTA TGCGAAGACT GACTTGGCGC ATTTGCGGGA ATTTGTGGAA
GCTGGTTTTG GCAATGGAGC GAGCATTGAG GGAGTGTCCA ATCGAGGTCA GGCGACTCTG
ACTTCGTTGA GCAGATCTGG GTGA
 
Protein sequence
MRGTALPASS QLWVDHGVEP AHAVPTTPEL AAQYLANALM HPVYENWNWQ RLIKVYGALP 
HARRAKPRVC KLLLNAPAVV EYWQKGKLHV VAGPDAPDPA SIVLAVLKSH KTRFRLVTAG
MPAKTTQTSP NDSQVPFAFA LRAWLQRTGR LYNPHEHTNT LGASDDYAAL SAFLRERTSR
SRHTWRAYTK ELERLVTWCQ EQNLGPLSDL TRQDLLKYKS RMQKMQSGNK PLEGDTPAQM
RPMAEKSQAR SLAVVASLYR YWHNTGYLQG NPAAGLTGGS RAQAGFAPTR MVSSELLARC
DAFIERSLQT SPPLQTADAN VWRRCAIWHL FRFSGARLAE LAWNPSKALP RVESDKVGAV
TLTVVGKGNK IRQIPLPTIC SHVLLSYRLA RGLPELPDTL EQIPLIHGEK AGYLGARGLY
NEVKAVLLAV AREIEQGDPQ SGTLLRTVSP HWLRHAYART LVVDKRVPLP AAQALLGHAS
VQTTAAYAKT DLAHLREFVE AGFGNGASIE GVSNRGQATL TSLSRSG