Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5548 |
Symbol | |
ID | 4016507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | - |
Start bp | 306204 |
End bp | 307787 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637945163 |
Product | phage integrase |
Protein accession | YP_552295 |
Protein GI | 91791345 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.174978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.321363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTGGGA CGGCTTTGCC AGCATCGTCT CAATTGTGGG TAGACCATGG CGTGGAGCCA GCACATGCGG TACCGACCAC CCCAGAACTT GCCGCCCAGT ACCTGGCCAA CGCACTGATG CACCCGGTGT ACGAAAACTG GAATTGGCAG CGACTGATCA AGGTTTACGG GGCACTGCCG CACGCTCGGC GCGCAAAGCC GCGGGTTTGC AAACTCCTGT TGAATGCCCC GGCAGTCGTG GAGTATTGGC AAAAGGGCAA ACTGCATGTG GTGGCGGGGC CAGATGCGCC GGATCCGGCC AGCATTGTTT TGGCGGTGCT CAAGTCGCAC AAAACGCGGT TTCGTTTGGT GACGGCGGGC ATGCCGGCGA AGACCACCCA AACCAGCCCG AACGACAGCC AAGTTCCATT TGCATTCGCA CTGCGCGCCT GGCTGCAAAG AACCGGCAGG CTCTATAACC CCCATGAACA CACCAACACC TTGGGCGCCA GCGATGACTA TGCGGCGCTG TCAGCATTCT TGCGTGAGCG TACCAGCCGC TCCAGGCACA CCTGGAGGGC GTACACGAAA GAGTTAGAAC GATTGGTCAC CTGGTGCCAA GAGCAGAACC TGGGGCCGCT CTCAGATCTG ACGCGGCAGG ACTTGCTGAA ATACAAGTCG CGCATGCAGA AAATGCAGTC TGGCAACAAA CCGCTCGAGG GGGATACGCC GGCACAGATG CGGCCCATGG CAGAAAAGTC ACAGGCGCGC TCGCTCGCGG TCGTGGCGAG TCTTTACCGC TACTGGCACA ACACCGGATA TTTACAGGGC AACCCCGCGG CAGGCCTTAC CGGTGGCTCC AGGGCACAAG CCGGGTTTGC GCCAACGCGC ATGGTGAGTT CGGAGCTTTT GGCGCGGTGC GATGCGTTTA TCGAGCGCAG CTTGCAGACG TCGCCGCCAT TACAAACAGC CGATGCCAAC GTCTGGCGCC GCTGTGCAAT CTGGCATTTG TTCCGGTTTA GCGGGGCGCG GCTTGCCGAG CTTGCCTGGA ATCCATCGAA GGCCTTGCCA CGCGTTGAGT CCGACAAAGT TGGCGCCGTC ACCCTGACCG TGGTTGGCAA GGGCAACAAG ATTCGCCAAA TTCCATTGCC CACCATTTGC TCCCATGTGC TGTTGAGCTA TCGACTGGCA AGAGGCCTGC CTGAACTGCC AGATACCCTT GAACAGATAC CGCTCATCCA TGGGGAAAAG GCCGGGTACC TTGGCGCACG CGGACTCTAC AACGAAGTCA AAGCAGTGCT GCTGGCGGTG GCCCGAGAAA TTGAGCAAGG CGATCCACAG AGTGGCACGC TGCTGCGCAC CGTGTCGCCG CACTGGTTAC GCCATGCCTA TGCCAGAACG CTGGTTGTGG ACAAACGTGT TCCACTGCCC GCCGCGCAGG CGCTACTTGG CCACGCATCG GTACAGACTA CTGCCGCGTA TGCGAAGACT GACTTGGCGC ATTTGCGGGA ATTTGTGGAA GCTGGTTTTG GCAATGGAGC GAGCATTGAG GGAGTGTCCA ATCGAGGTCA GGCGACTCTG ACTTCGTTGA GCAGATCTGG GTGA
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Protein sequence | MRGTALPASS QLWVDHGVEP AHAVPTTPEL AAQYLANALM HPVYENWNWQ RLIKVYGALP HARRAKPRVC KLLLNAPAVV EYWQKGKLHV VAGPDAPDPA SIVLAVLKSH KTRFRLVTAG MPAKTTQTSP NDSQVPFAFA LRAWLQRTGR LYNPHEHTNT LGASDDYAAL SAFLRERTSR SRHTWRAYTK ELERLVTWCQ EQNLGPLSDL TRQDLLKYKS RMQKMQSGNK PLEGDTPAQM RPMAEKSQAR SLAVVASLYR YWHNTGYLQG NPAAGLTGGS RAQAGFAPTR MVSSELLARC DAFIERSLQT SPPLQTADAN VWRRCAIWHL FRFSGARLAE LAWNPSKALP RVESDKVGAV TLTVVGKGNK IRQIPLPTIC SHVLLSYRLA RGLPELPDTL EQIPLIHGEK AGYLGARGLY NEVKAVLLAV AREIEQGDPQ SGTLLRTVSP HWLRHAYART LVVDKRVPLP AAQALLGHAS VQTTAAYAKT DLAHLREFVE AGFGNGASIE GVSNRGQATL TSLSRSG
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