Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5545 |
Symbol | |
ID | 4016504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | + |
Start bp | 302917 |
End bp | 305454 |
Gene Length | 2538 bp |
Protein Length | 845 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637945160 |
Product | transposase Tn3 |
Protein accession | YP_552292 |
Protein GI | 91791342 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.288068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAATA GCCGCTCGGA CCACACCTCG CTTCTTCCAG AGACCAAGCG CTGGTTCTAC GACCACCGCA TACTGCAAAT TGCGCCCCGT GAACTCAAAA GCCTGATAGC TGGTGCACTC AAAGACCATG AAGCGCAACA GCTCAAGGCG ATTGAGCATG CGTATGGCCA GCAAAAGCTT CAGGAGTGGG AGTTGGCCCT GAACTCCAAG ACCAAGGATG GCACCCCATT GCAATCCTGG CTGTGGGCGG CACCGCTGAA GCAGTCCACG GTCCAGATCA CCCAGTTTTT TGACAAGGTG GACCATTTGC GCACCATGGG TGTTGCCGAC CATTGGCCCG CCACCGTGAA TGACGCGGCC GTTCGCCACT ATGCCCGGCG TTGCGCACAC CGCGCGCCAT CGGTCAGCAA GCGCATTACC CCGACACGCC GCAGTCTGGA AGTCGCGTGT TTTCTGCGCT ATGCCCTGTG CACGTCCTCG GACCAGTTGC TTTTGATGCT GCGCCGCTGG ATTCGCAAGA TGGCCAACGA TGCCGCGCGC GAAACCACGC CCAGCTATGC GGACGCCCAC GCCAAACTGA CGAAGTTTGC GCTGAGCGTC AAAAAGCTGG CCAACGAGGA AGCGCTTTCG CACGCCGATC TCAAATCCAA GCTGGTCGAA GTGACTACTG CGGTACTGAC CGACCCCAAA ATCAGCCGCT CTGCGCTGGC AAGAACCTAC CTGGTTGATC ATCCAAACCA GTCGCGTGCT TTGTTGGGCA GGCTGCTGAC GCTGCCTCTG GCCGCCCAGG CAGATCATCC AGTGATGCAA GCGCTGGAAG TGCTGCGCAA AACCTACGCC GCCCGTGCGA CATCCCTGGC CACGACACCA ACCATCAAAC TGGGGAACCG GTGGCAGAAG GTGATCGCTG GCGCCGACCG CCAGAAGGCC CTGGCCGCGT TTGAATGGGC GACGCTATTT GCCTTGCGCA TGGCGCTGCG AAACGGTTCC GTGTACCTGG ATCACAGCTT CGTGTTTCGC AGCCAGGCCA CGCTTTTCAT CACCAGGGAA GACTGGCAAA AGAGTCGGGA CATGCACTAT TCCCAACTGG GCCTCTCCAT GGACCCCAAG GAAACCCTGG AGCCGTTGGC AGAACACCTG GAAAAGCGGC TGCAAGACTT TGCTGCGGCC GCGTCATCTG GCCAAATTCA GGTTGACGCT GACGGCATTC ACCAGGAGCG CAAGGTGGCC AGTCCTGAAG AGGTTCGGGT GACCGCGTTG CGCCGCGCCC TGATGGAAGG CAGACCACTG GGCCAGTTGC CGGAAATCGT GTTGGAGATT GACAGCGCCG TGCGGTTTAG CTGGATGCTG TTGGGCCGCG AACCCAACAG CCGACGAGAG CTCCTGATGG TCTACGCGGC GGTCTTCGCC CATGGCACCT CGATGTCAGC GTCTGACGTA TCGCGCATGA TTCCGGAATT GCCGGTGGAG GCGGTACGCC AGACCATGAA GCGTCTGAGG GATGAACGCC GGTTGCGCCA GGCCAGCGAT GCTGTCGTCC AGTACCTGCA CCGGTTTGAA ATTGCCAAGC ACTGGGGCCG CTCGGATCTG GCGTCCTCGG ACATGATGAG CCTGGAGACC GAGCGCGCCA TTTGGCAATC GCGCGCCGAT CCACGGCGGA AAACTGCATC CATTGGGATC TATACCCATG TTCGGGACGG CTGGGGCATT GTGTACGACC AGCCCATTGT GCTCAATGAG CGCCAGGTCG GGGTCGCCAT CGAAGGTGCT ATTCGGCAAA GCGCGGTGGA AGACGTGGGC CAACTTGCCG TCGACACCCA TGGGTACACG GATTTCGGCA TGGCGGTGGC CAAGCTGCTC AGGTTGGACC TGTGTCCCTG CCTGGCGGAC ATCAAGCACC GCAAGTTGTA CGCGCTCAAA GGCTACACGG TGCCGGACGT TCTGGATCGA GTCGTGGCTT GCACTCTGGA GCTTTCTGTC ATGGAGGCTG TGCTTGACGA ATTGGTGCGC ATTGCGGCGT CCATTCGCAG CGGTCAGTGC AGTGCCGTAC AGGCGTTGAC CCGGTTCGGA TCTGCCGCGC GCGGCCAATC CGTTTATGAC GGCGGCGTTC AGTTCGGGCA GTTGCTATGC ACGATCTTCA AGGTGGACTA TTTGTTGAAT CCGCTGTTCA AATCTGAGAT CCGTCATGCG CTCAACCGTG GGGAGTCCTC CCACACCTTG CAGCACGCCA TCCATTCCGG GAAGATTCCA GCAGCGCTTT CCAAGCGCAC GGAGTCGCTC GCGGCCGTGT CGTCGGCACT GAGCCTTTTG TCCAACAGCG TGATGGCGTG GAATGCGGGG CACATGCAAC CCGCTTGGGA GGGGATCAAG GCTGCTGGCG GCGAGCCACT CACTGAGGAT CTGCGCCGCG TTGCGCCCAC CAACATTGAG GGGATCAACC TGCGCGGGAC GTTTGATTTT CCGGTGGAGA AATTTGCTCA GCGAATTCTG CCCAGCTCTG TGAATCTCAA AGATTTGGGT AAGAGGCGTA TCGCATGA
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Protein sequence | MLNSRSDHTS LLPETKRWFY DHRILQIAPR ELKSLIAGAL KDHEAQQLKA IEHAYGQQKL QEWELALNSK TKDGTPLQSW LWAAPLKQST VQITQFFDKV DHLRTMGVAD HWPATVNDAA VRHYARRCAH RAPSVSKRIT PTRRSLEVAC FLRYALCTSS DQLLLMLRRW IRKMANDAAR ETTPSYADAH AKLTKFALSV KKLANEEALS HADLKSKLVE VTTAVLTDPK ISRSALARTY LVDHPNQSRA LLGRLLTLPL AAQADHPVMQ ALEVLRKTYA ARATSLATTP TIKLGNRWQK VIAGADRQKA LAAFEWATLF ALRMALRNGS VYLDHSFVFR SQATLFITRE DWQKSRDMHY SQLGLSMDPK ETLEPLAEHL EKRLQDFAAA ASSGQIQVDA DGIHQERKVA SPEEVRVTAL RRALMEGRPL GQLPEIVLEI DSAVRFSWML LGREPNSRRE LLMVYAAVFA HGTSMSASDV SRMIPELPVE AVRQTMKRLR DERRLRQASD AVVQYLHRFE IAKHWGRSDL ASSDMMSLET ERAIWQSRAD PRRKTASIGI YTHVRDGWGI VYDQPIVLNE RQVGVAIEGA IRQSAVEDVG QLAVDTHGYT DFGMAVAKLL RLDLCPCLAD IKHRKLYALK GYTVPDVLDR VVACTLELSV MEAVLDELVR IAASIRSGQC SAVQALTRFG SAARGQSVYD GGVQFGQLLC TIFKVDYLLN PLFKSEIRHA LNRGESSHTL QHAIHSGKIP AALSKRTESL AAVSSALSLL SNSVMAWNAG HMQPAWEGIK AAGGEPLTED LRRVAPTNIE GINLRGTFDF PVEKFAQRIL PSSVNLKDLG KRRIA
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