Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5481 |
Symbol | |
ID | 4016440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | - |
Start bp | 231854 |
End bp | 233251 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637945101 |
Product | HNH endonuclease |
Protein accession | YP_552233 |
Protein GI | 91791283 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.229797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGTGTA CCGAGAAGCG GGCTCGGCTG TTGCTGGCGC GCGGCCGGGC GCGCGTGCAT AGGCTGACTC CCATGGTGAT CCGGCTCGTT GACCGTCAGG CCGCCGCCTG CGACTTTCAG CCGCTTCGCC TCAAGCTCGA TCCTGGCAGC AAGACCACCG GCGTGGCGCT GGTGAGGGAT GTGGAATCGA TCGAGGTTGC CACCGGGGAA ATTCACTGCG GCGTTGCCGT GTTGAATTTG ATGGAGCTGG TCCATCGGGG CCGGCATATC TCCGAAGCTT TGACGGCGCG CCGTCAAATG CGTAGGCGCC GCAGGAGCAA TTTGCGCTAT CGCGCACCCA GGTTCCTGAA CCGCGGCAAC AAGAAGTCCG GCTGGATCGC GCCCTCCTTG CAGCACCGGG TGGACACAAG CATAGCCTGG GTCAAGCGCA TCCAGCACTG GGCACCGGTG AGGGCCATCA GCTCCGAGCG GGTGCGCTTT GACATGCAGG CCCTTCAGAA CCCAGAGATT TCAGGCGTGG AGTACCAGCA AGGCACCTTG TACGGCTACG AGCTGCGCGA GTATTTGCTG GAAAAATGGG GCCGTCAGTG CGCCTACTGC GACGCCAAAG ACACCCCCTT GCAGATCGAG CACATCCGGC CCAAGGCTTT GGGCGGAAGC AACCGCGCCT CCAACCTGAC CCTGGCGTGC CAGTGCTGCA ACCAGAAGAA AGCTGCGCGC AGCATCGAAG ATTTCTTGGC CAGGGACAAA AAGCGACTGG ATCGCATCCT GGCGCAAGCC ACAAAACCGC TGAGAGATGC TGCGGCGGTG AACGCCACAC GATGGACGCT GGCCAACGCG CTGAAAGCCA CCGGCCTGCC GGTGGAGCTG GCTTCAGGCG GCCAAACCAA GTTCAACCGT TGCCGGCTTG GCGTTCCCAA GACCCATGCG CTCGATGCGG CCTGCGTGGG CCAGGTGAGA TTCATCCAGG ACTGGAGCAA GCCAACCCTT ACGCTCAAGG CCATGGGTCG GGGCAGCTAC CAGCGCACGC GCCTGGACAA GTTCGGCTTT CCGCGCGGGT ACCTGATGCG CAGCAAGCGG GTGCATGGGT TTGGCACCGG CGATATGGTG CGCGCCGATG TGACCAAGGG CGTCAAGGCC GGTCATCACG CCGGCCGGGT CGCGGTGCGC GCCAGTGGCA GTTTCAACAT CCAGACTCGC CGGAACGGTA TCTCCGGTGT TATCCAGGGC ATCAGTCACA AGCATTGCCG AGTGATCCAG CGCAACGACG GCTATGGCTA TTTCTTCAAC CGGACCGATC ACACAGGACG TGAGCAGGTA AGGCCCAAGG CTTCGGATGC TGCGCATCCG GCGCTCTACC TCCCAGCCAT GAATGGCAGG GTTTCACGCG CGATTTGA
|
Protein sequence | MPCTEKRARL LLARGRARVH RLTPMVIRLV DRQAAACDFQ PLRLKLDPGS KTTGVALVRD VESIEVATGE IHCGVAVLNL MELVHRGRHI SEALTARRQM RRRRRSNLRY RAPRFLNRGN KKSGWIAPSL QHRVDTSIAW VKRIQHWAPV RAISSERVRF DMQALQNPEI SGVEYQQGTL YGYELREYLL EKWGRQCAYC DAKDTPLQIE HIRPKALGGS NRASNLTLAC QCCNQKKAAR SIEDFLARDK KRLDRILAQA TKPLRDAAAV NATRWTLANA LKATGLPVEL ASGGQTKFNR CRLGVPKTHA LDAACVGQVR FIQDWSKPTL TLKAMGRGSY QRTRLDKFGF PRGYLMRSKR VHGFGTGDMV RADVTKGVKA GHHAGRVAVR ASGSFNIQTR RNGISGVIQG ISHKHCRVIQ RNDGYGYFFN RTDHTGREQV RPKASDAAHP ALYLPAMNGR VSRAI
|
| |