| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5447 |
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| Symbol | |
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| ID | 4016406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | - |
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| Start bp | 198525 |
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| End bp | 199598 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637945067 |
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| Product | type II secretion system protein |
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| Protein accession | YP_552199 |
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| Protein GI | 91791249 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.115593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0802201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTG AGCAGCTCAG CATCGACTTT GCGCGGTTCC AGTTCCGGAA TGATGCCAAA
GCACGCCAAC GGCTATGGAA AAAAATGTCC AAGCTGCTTG GCGACGGCAT TTCGATTATT
CCGGCCTTGC AGGAGCTCAA GGCCCTGAAT AAACCCACGT CCCCGCTCGC TCTTGCGCTG
GCTGACTGGA TCCGTGGGCT GAACAATGGG CGCAAGATTT CTGATGTCGT CAGGCCCTGG
GTTTCTACTG AGGAATACAT GCTGATCGTA GCTGGGGAAC AGTCGGGCAA GCTCAGTGAT
TCCCTTCTTT CTGTCGTGAG GGTGTCTAAG GCCAAATTGG AAATACGCAC TGCCGTTGTA
AGTGGCATTG CATATCCAGC ATTTCTGGCC GTCTTGTCAT TTGGCATTCT CTATCTGTTT
GCCTTCAAGA TCATCCCAGC ATTTACCAAA GCTGCGAAGT CTGATTCATG GTTCGGTGCG
GCCCGGCTCA TGATTGACGT GTCATCGTTT GTTCAGAACT GGCTCGTCTG GATGGTAATT
TTGCTCATCA TTATTACGAT CGCCTTCTTC GTCTCACTTC CTCTGTGGAA TTCATCGCTG
CGCACCAAGC TGGATCGTTA TCCGCCCTAC AGCATTTACC GCGTTATGCA GGGCTCCTCC
TGGTTGATCG CGCTTTCGGC GCTTGTCCAG GCCGGCACGC GCGTTGAGTC GGCCATTGAG
CAACTAGGCC AAGGCGCCTC TGCGTGGGCT GCAACCAGGT CGGCAGCTGC GCTGAAGGGA
CTCCGTGCAG GTCGCGACCT TGGTGAGTCG CTACAGAAAT CTGGATATGA GTTCCCTGAC
AGGGAAATTA TTTCAGACAT ACGCATCTAC GCAACCAAGT CGGGATTCGA TGAAGCTTTG
CGCATCATCG GGAACGACTG GATCACAGAG TCGGTTGAGC GTATTCAGGC CCTGATGAAG
ATCATATTTG GTATTGCACT GATGCTCGTC GGTTCGCTTA TTGCGTTTGT GGTGTCTGGC
CTCATTGCGA TGCAACTTCA GCTGACGCAG TTGCTGCAGC GAGGCGTTCA TTAA
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| Protein sequence | MNLEQLSIDF ARFQFRNDAK ARQRLWKKMS KLLGDGISII PALQELKALN KPTSPLALAL
ADWIRGLNNG RKISDVVRPW VSTEEYMLIV AGEQSGKLSD SLLSVVRVSK AKLEIRTAVV
SGIAYPAFLA VLSFGILYLF AFKIIPAFTK AAKSDSWFGA ARLMIDVSSF VQNWLVWMVI
LLIIITIAFF VSLPLWNSSL RTKLDRYPPY SIYRVMQGSS WLIALSALVQ AGTRVESAIE
QLGQGASAWA ATRSAAALKG LRAGRDLGES LQKSGYEFPD REIISDIRIY ATKSGFDEAL
RIIGNDWITE SVERIQALMK IIFGIALMLV GSLIAFVVSG LIAMQLQLTQ LLQRGVH
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