| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5439 |
|---|
| Symbol | |
|---|
| ID | 4016398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007950 |
|---|
| Strand | - |
|---|
| Start bp | 189604 |
|---|
| End bp | 190560 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637945059 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_552191 |
|---|
| Protein GI | 91791241 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.409954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.431845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTCTG CCAATCACAC CGTTGCCGTC ATTCTTCCTG CCTACAACGA AGAGTTGACG
ATCAGACAGG TCATCCTGGA CTTCCATGCT GCGCTGCCTG ACGCCACCAT ATGCGTGATC
GACAACAACT CCAGCGACCG TACCTCCGCA ATCACTGAAA CGACATTTGA AGAGTTGGGC
TGCGAGGGGC GGTTGATTCG CGAGTACCGG CAAGGCAAGG GAAATGCATT ACGCCGTGCA
TTTTCCGACG TGGACGCCGA CATTTATTTG CTGGCTGACG CCGATCAGAC TTATCCGGCA
TCTCGCGCCG CCGACATGAT CGCACCTGTT GCGCTAGGCG AGGCCGACAT GGTGGTAGGC
GATCGGCATT CGGGTGGGCA TTACAAGGAC CACAACAAAC GCCGCTTTCA TGGGTTCGGC
AACGATCTTG TCAAAAACAT GATCAATTTG TTTTTCCGAT CCACTTTGCA GGACATCATG
AGCGGGTATC GTGCCTTCAG CCGTACCTTT GTGAAGACCT ATCCAGTAAT GGTTGCGGGC
TTTCAAGTCG AAACTGATAT GACCCTGCAT GCGCTTGATA AACGTTTTCG CGTTATGGAA
ATTCCTGTGG AATATGTGGA CAGGCCGGCA GGCAGCTTTT CCAAGCTCAA CACTTTGGCC
GATGGCGCCA AGGTCATTTT TGCAATCTTC CAGATACTGC GCTATTACAA GCCGTTTGCG
TTTTTTGGTA CGGTTTCCAT GCTACTCATG GTGCTCGGTT TTATTGCCGG TTTTCCAGTG
TTGGTTGACT GGTTTACGTA CCAATATATC TACCATGTCC CGCTGGCGGT GCTTGCTGCG
GCGCTGGAAA TCGTGGCGGT GATCTTTTGT TTCGTGGCAC TGATGCTCGA CAGCATCGCG
CAGCAGCACA GGATGAGGTA CGAACTCATG ATCGTGTCCA TGACGAATAG AACCTGA
|
|---|
| Protein sequence | MSSANHTVAV ILPAYNEELT IRQVILDFHA ALPDATICVI DNNSSDRTSA ITETTFEELG
CEGRLIREYR QGKGNALRRA FSDVDADIYL LADADQTYPA SRAADMIAPV ALGEADMVVG
DRHSGGHYKD HNKRRFHGFG NDLVKNMINL FFRSTLQDIM SGYRAFSRTF VKTYPVMVAG
FQVETDMTLH ALDKRFRVME IPVEYVDRPA GSFSKLNTLA DGAKVIFAIF QILRYYKPFA
FFGTVSMLLM VLGFIAGFPV LVDWFTYQYI YHVPLAVLAA ALEIVAVIFC FVALMLDSIA
QQHRMRYELM IVSMTNRT
|
|---|
| |