| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5422 |
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| Symbol | |
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| ID | 4016381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007950 |
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| Strand | - |
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| Start bp | 173412 |
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| End bp | 174581 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637945042 |
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| Product | IS4 family transposase |
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| Protein accession | YP_552174 |
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| Protein GI | 91791224 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.219241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTCG GCAAGACGCT GTTTGCGCAG GTCATGGAGT TTGTTCCATG GACGAGTTTT
TCGCGCATCG TGCAGCGCCA CGGTGGAGAC GCCGGGGTAC GCAGGATGAA TTGCGCCGAA
CAGTTTCGCG TCATGGCGTT TGCGCAGTTG ACTTGGCGCG AGTCCTTGCG CGACATCGAG
GTGACGCTGG GAGCGAACGC CGGCAAGCTC TATTCGATGG GTTTGCGCCA CAGCGTTCAT
CGATCCACTT TGGCCGACGC AAACGACTCG CGGGATTGGC GCATTTGGTC CGACCTCGCG
GCCTTGCTCA TTCGACGAGC CCGCAAGCTC TACCGCGAAG AGGACTTGGG GCTGGACTTG
ACCAATACGG TTTACGCCCT GGATGCAACG ACGATCGATC TGTGTTTGAG CCTGTTCGAC
TGGGCCCCGT TTCGCAGCAC CAAGGCAGCC GTGAAGATGC ACACGTTGCT GGACTTGCGC
GGCTCCATTC CCGCCTTCAT CCACATCAGC GACGGCAAGA TGGGCGATGT CAACGTGCTG
GACTTCCTGC CCGTCGAGGC GGGCGCCTTC TACGTGATGG ATCGTGGCTA TCTGGACTTC
GCTCGCCTGT ACAAGATGCA TCAGGCCGGC GCCTTCTTCG TCACACGCGC CAAGCGCGGC
ATGAACGCCA GGCGGGTGTA CTCGGCTCAG ACCGACAGGG CGACTGGCGT GATCTGCGAT
CAGAGCATTG CGATGAATGG CTTCTACGTC TGCAAGGACT ACCCCGAGCA GTTGCGCCGC
ATTCGCTTCA AAGACCCCGA GACGGGCAAG ACGCTGGTGT TCCTGACCAA CAACACGACC
CTGCCAGCGC TGACCATCGC CGCTTTGTAC AAGAGCCGCT GGCAGGTGGA GTTGTTCTTC
AAGTGGATCA AGCAGCATTT GCGGATCAAG AAATTTCTGG GCACGAGCGA GAACGCCGTG
AAAACGCAAA TCTGGTGCGC CGTCTGCACC TACGTGCTCA TCGCCATCGT CAAGAAGGAG
CTTCAACTCG ATGCCTCGCT CTACACATTG CTACAGATTC TTTCCGTCTC GATCTTCGAG
AAAACTCAGC TCTCATGCGC CCTGCAGCTC GGTTTCCCAA TTCCAGAAAC ACCGCTTGGT
GATAACCAGT TGAATCTGTT CAACTTTTAA
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| Protein sequence | MNVGKTLFAQ VMEFVPWTSF SRIVQRHGGD AGVRRMNCAE QFRVMAFAQL TWRESLRDIE
VTLGANAGKL YSMGLRHSVH RSTLADANDS RDWRIWSDLA ALLIRRARKL YREEDLGLDL
TNTVYALDAT TIDLCLSLFD WAPFRSTKAA VKMHTLLDLR GSIPAFIHIS DGKMGDVNVL
DFLPVEAGAF YVMDRGYLDF ARLYKMHQAG AFFVTRAKRG MNARRVYSAQ TDRATGVICD
QSIAMNGFYV CKDYPEQLRR IRFKDPETGK TLVFLTNNTT LPALTIAALY KSRWQVELFF
KWIKQHLRIK KFLGTSENAV KTQIWCAVCT YVLIAIVKKE LQLDASLYTL LQILSVSIFE
KTQLSCALQL GFPIPETPLG DNQLNLFNF
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