Gene Bpro_5402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_5402 
Symbol 
ID4016361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007950 
Strand
Start bp159025 
End bp160422 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content64% 
IMG OID637945022 
ProductHNH endonuclease 
Protein accessionYP_552154 
Protein GI91791204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.243535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTGCA CCGAGAAGCG GGCCAGGCTG CTGCTGGCAC GCGGCCGGGC GCGCGTGCAT 
CGGCTGGTGC CACTGGTGAT CCGGCTTGTT GACCGTCAGG CCGCCGCCTG CGACTTTCAG
CCGCTACGGA TCAAGCTCGA TCCGGGCAGC AAGACCACCG GCGTCGCGCT GGTGAGGGAT
GTGGAATCGG TTGACGCGTC CACGGGTGAA ATTCATAGTG GGGTAGCCGT CATCAACCTG
CTGGATCTGG TCCACCGGGG CCGGCAGATA TCCGAAGCCT TGACGGCTCG TCGTCAGATG
CGCCGGCGCC GCAGGAGCAA TTTGCGCTGT CGCGCACCCA GGTTCCTGAA CCGCGGCAAC
AAGAAGTCCG GCTGGATCGC GCCCTCCCTG CAGCACCGGG TGGACACGGC CATGGCCTGG
GTCAGGCGCA TTCAACGCTG GGCGCCGGTG AGGGCCATCA GCTCCGAGCT GGTGCGCTTT
GACATGCAGG CACTGCAAAA CCCAGAAATT TCCGGCGTGG AGTACCAGCA AGGCACCTTG
TTCGGCTACG AACTGCGTGA GTATTTGCTG GAGAAATGGG GCCGCCAGTG CGCCTACTGC
GACGCCAAGG ACACCCCCTT GCAGATTGAG CACATCCGGC CCAAGGCCTT GGGCGGCAGC
AATCGCGCCT CCAACCTGAC CTTGGCCTGC CAGTGCTGCA ACCAGAAAAA GGCAGCGCGC
AGCATCGAAG AGTTCCTGGC CAAAGACAAG AAGCGGCTCA CCGGCATCCT GGCGCAAGCC
CAGAAGCCTT TGCGCGATGC CGCAGCGGTG AATGTCACGC GCTGGGCCCT GGCCAATGCC
CTGAAGGCCA CCGGCTTGCC GGTGGAGCTG GCTTCCGGCG GCCGAACGAA GTTCAATCGC
TGCACCCTGG GCGTGCCCAA GACCCATGCG CTCGATGCGG CCTGCGTGGG CCAGGTGAGA
TTCATCCAGG ACTGGAGCAG GCCAACCCTA ACGCTCAAGG CCATGGGTCG GGGCAGCTAC
CAGCGCACGC GCCTGGACAG GTTTGGCTTT CCGCGCGGGT ACCTGATGCG CGGCAAGCGT
GTGCAGGGCT TTGGCACCGG CGATATGGTG CGCGCCGATG TGCCCAAGGG CGTCAAGGCC
GGGGTTCACG TTGGCCGAGT GGCGGTACGC GCCAGCGGCA GTTTCAACAT CCAGACCCAT
CAGGGCGGAA TCTCCGGTGT GGTTCAGGGC ATCAGCCATA AGCATTGCCG GGTGACGCAG
CGCAACGACG GGTATGGGTA TTTCTTCAAC CGGGCCGATC ACACAGGGCG TGAGCAGGTA
TGGCCCAAGG CATCGGATGC TGCGCATCCG GCGCTCTACC TCCCCGCCAT GAATGGCAGG
GTTTCACGCG CAATCTGA
 
Protein sequence
MPCTEKRARL LLARGRARVH RLVPLVIRLV DRQAAACDFQ PLRIKLDPGS KTTGVALVRD 
VESVDASTGE IHSGVAVINL LDLVHRGRQI SEALTARRQM RRRRRSNLRC RAPRFLNRGN
KKSGWIAPSL QHRVDTAMAW VRRIQRWAPV RAISSELVRF DMQALQNPEI SGVEYQQGTL
FGYELREYLL EKWGRQCAYC DAKDTPLQIE HIRPKALGGS NRASNLTLAC QCCNQKKAAR
SIEEFLAKDK KRLTGILAQA QKPLRDAAAV NVTRWALANA LKATGLPVEL ASGGRTKFNR
CTLGVPKTHA LDAACVGQVR FIQDWSRPTL TLKAMGRGSY QRTRLDRFGF PRGYLMRGKR
VQGFGTGDMV RADVPKGVKA GVHVGRVAVR ASGSFNIQTH QGGISGVVQG ISHKHCRVTQ
RNDGYGYFFN RADHTGREQV WPKASDAAHP ALYLPAMNGR VSRAI