Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5402 |
Symbol | |
ID | 4016361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | + |
Start bp | 159025 |
End bp | 160422 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637945022 |
Product | HNH endonuclease |
Protein accession | YP_552154 |
Protein GI | 91791204 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.243535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTGCA CCGAGAAGCG GGCCAGGCTG CTGCTGGCAC GCGGCCGGGC GCGCGTGCAT CGGCTGGTGC CACTGGTGAT CCGGCTTGTT GACCGTCAGG CCGCCGCCTG CGACTTTCAG CCGCTACGGA TCAAGCTCGA TCCGGGCAGC AAGACCACCG GCGTCGCGCT GGTGAGGGAT GTGGAATCGG TTGACGCGTC CACGGGTGAA ATTCATAGTG GGGTAGCCGT CATCAACCTG CTGGATCTGG TCCACCGGGG CCGGCAGATA TCCGAAGCCT TGACGGCTCG TCGTCAGATG CGCCGGCGCC GCAGGAGCAA TTTGCGCTGT CGCGCACCCA GGTTCCTGAA CCGCGGCAAC AAGAAGTCCG GCTGGATCGC GCCCTCCCTG CAGCACCGGG TGGACACGGC CATGGCCTGG GTCAGGCGCA TTCAACGCTG GGCGCCGGTG AGGGCCATCA GCTCCGAGCT GGTGCGCTTT GACATGCAGG CACTGCAAAA CCCAGAAATT TCCGGCGTGG AGTACCAGCA AGGCACCTTG TTCGGCTACG AACTGCGTGA GTATTTGCTG GAGAAATGGG GCCGCCAGTG CGCCTACTGC GACGCCAAGG ACACCCCCTT GCAGATTGAG CACATCCGGC CCAAGGCCTT GGGCGGCAGC AATCGCGCCT CCAACCTGAC CTTGGCCTGC CAGTGCTGCA ACCAGAAAAA GGCAGCGCGC AGCATCGAAG AGTTCCTGGC CAAAGACAAG AAGCGGCTCA CCGGCATCCT GGCGCAAGCC CAGAAGCCTT TGCGCGATGC CGCAGCGGTG AATGTCACGC GCTGGGCCCT GGCCAATGCC CTGAAGGCCA CCGGCTTGCC GGTGGAGCTG GCTTCCGGCG GCCGAACGAA GTTCAATCGC TGCACCCTGG GCGTGCCCAA GACCCATGCG CTCGATGCGG CCTGCGTGGG CCAGGTGAGA TTCATCCAGG ACTGGAGCAG GCCAACCCTA ACGCTCAAGG CCATGGGTCG GGGCAGCTAC CAGCGCACGC GCCTGGACAG GTTTGGCTTT CCGCGCGGGT ACCTGATGCG CGGCAAGCGT GTGCAGGGCT TTGGCACCGG CGATATGGTG CGCGCCGATG TGCCCAAGGG CGTCAAGGCC GGGGTTCACG TTGGCCGAGT GGCGGTACGC GCCAGCGGCA GTTTCAACAT CCAGACCCAT CAGGGCGGAA TCTCCGGTGT GGTTCAGGGC ATCAGCCATA AGCATTGCCG GGTGACGCAG CGCAACGACG GGTATGGGTA TTTCTTCAAC CGGGCCGATC ACACAGGGCG TGAGCAGGTA TGGCCCAAGG CATCGGATGC TGCGCATCCG GCGCTCTACC TCCCCGCCAT GAATGGCAGG GTTTCACGCG CAATCTGA
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Protein sequence | MPCTEKRARL LLARGRARVH RLVPLVIRLV DRQAAACDFQ PLRIKLDPGS KTTGVALVRD VESVDASTGE IHSGVAVINL LDLVHRGRQI SEALTARRQM RRRRRSNLRC RAPRFLNRGN KKSGWIAPSL QHRVDTAMAW VRRIQRWAPV RAISSELVRF DMQALQNPEI SGVEYQQGTL FGYELREYLL EKWGRQCAYC DAKDTPLQIE HIRPKALGGS NRASNLTLAC QCCNQKKAAR SIEEFLAKDK KRLTGILAQA QKPLRDAAAV NVTRWALANA LKATGLPVEL ASGGRTKFNR CTLGVPKTHA LDAACVGQVR FIQDWSRPTL TLKAMGRGSY QRTRLDRFGF PRGYLMRGKR VQGFGTGDMV RADVPKGVKA GVHVGRVAVR ASGSFNIQTH QGGISGVVQG ISHKHCRVTQ RNDGYGYFFN RADHTGREQV WPKASDAAHP ALYLPAMNGR VSRAI
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