Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_5394 |
Symbol | |
ID | 4016353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007950 |
Strand | - |
Start bp | 151906 |
End bp | 153291 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637945014 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_552146 |
Protein GI | 91791196 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.172533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAGG CAAAGCGTCA GATGCCGGAC CAATCCGGGC GGGTGAGCGT AGCGCACGGT GAAGCTGTGC GCGATCTCAT CAGCGACGAA GCCTGCGACC CGCTCTCTGA ACACCCGGAC ATAGGGTCGG TAAAGTCAAA GGCAGGCACA GGTGGCCTGC TGGAAGCGGC GCTGACAAGA GAGAACCTGC AAGTGGCATG GAAGCGGGTC AAGGCCAACA AGGGTGCTGC CGGGGTGGAC GGGCTCGACA TCGAGCACAC TGCTCAGACA ATACGCAACC ATTGGTCCCA AATCCGCCAA GAGCTGCTGG CAGGAACGTA CCGGCCAAGC CCGGTGCGAC GGGTGATGAT TCCCAAACCC GATGGAAGCC AGCGTGAGCT GGGCATTCCG ACGGTGCTGG ATCGGTTGAT CCAGCAGGCA CTGCTGCAAG TGCTGCAACC CCTGATCGAT CCTACATTTA GCGAGCACAG CCACGGGTTT CGTCCTGGGC GGCGTGCGCA CGACGCGGTG AAGGCCGCGC GGGCGCACGT GCAATCGGGC AAACGTGTAG TGGTTGACGT GGACCTGTCG AAGTTCTTCG ACCGGGTCAA TCACGACATC CTGATCGACA GACTCAGAAA GCGTGTCGAT GATGCCGGAG TCATCCGGCT GATTCGGGCG TACCTGAACG CTGGGATCAT GGATGGAGGG GTGGTGATGG ATCGTCAACA GGGCACGCCG CAGGGTGGGC CCCTGTCACC GCTGTTGGCC AACGTGCTGC TGGACGAAGT GGACAAGGTG TTGGAGGCGC GGGGCTATAG CTTTGCGCGC TACGCTGATG ACTGCAACGT CTATGTGGGC AGTGTGAAGG CGGGGCAGCG GGTGATGGAG CTGCTCAGGA AGTTGTACGC CGGGCTGAAG CTTCAAATCA ACGAAGCCAA GAGTGCGGTG GCAAGCGCCT TCGGGCGCAA GTTTCTGGGC TACGCGCTGT GGGTGGCTAA GGGCAAAGAG GTCAAATGCA AAGTGGCTGA GAAGCCGCTG CGCGACTTCA AGGCCCGAAT CCGACAACTC ACGAGCCGCT CGGGCGGGCG CAGCATGGAG CAAGTGGTGG AAAAGCTCAG GCCCTATGTG CTGGGCTGGA AAGCGTATTT CGGACTGGCG CAAACACCAA GAGTCTGGCG TGAGCTGGAC AAATGGTTAC GTCACCGACT AAGGGCGATT CAGCTTAAAC ATTGGAAGCG GCCGGGGACG ATTTACCGAG AGCTCAGAGC ACTTGGTGCA GACGAAGATG TTGCAAAACG GGTGGCGGTG TACAGTCGCC GCTGGTGGCG CAACAGCGCT ATGCTGCTGA ACAATGTGTT GACAATCGCT TACTTCGATC GAATGGGCGT ACCCCGACTC TCATGA
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Protein sequence | MLKAKRQMPD QSGRVSVAHG EAVRDLISDE ACDPLSEHPD IGSVKSKAGT GGLLEAALTR ENLQVAWKRV KANKGAAGVD GLDIEHTAQT IRNHWSQIRQ ELLAGTYRPS PVRRVMIPKP DGSQRELGIP TVLDRLIQQA LLQVLQPLID PTFSEHSHGF RPGRRAHDAV KAARAHVQSG KRVVVDVDLS KFFDRVNHDI LIDRLRKRVD DAGVIRLIRA YLNAGIMDGG VVMDRQQGTP QGGPLSPLLA NVLLDEVDKV LEARGYSFAR YADDCNVYVG SVKAGQRVME LLRKLYAGLK LQINEAKSAV ASAFGRKFLG YALWVAKGKE VKCKVAEKPL RDFKARIRQL TSRSGGRSME QVVEKLRPYV LGWKAYFGLA QTPRVWRELD KWLRHRLRAI QLKHWKRPGT IYRELRALGA DEDVAKRVAV YSRRWWRNSA MLLNNVLTIA YFDRMGVPRL S
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