| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_5348 |
|---|
| Symbol | |
|---|
| ID | 4016307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007950 |
|---|
| Strand | + |
|---|
| Start bp | 115491 |
|---|
| End bp | 116279 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637944970 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_552102 |
|---|
| Protein GI | 91791152 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.109769 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGG TTTCCAGCTA CCCACGTACC CGTGGCACCT ATGTGTCACC CGAAGTCATT
CGGGCACTTC TGGCACAGGG CTATATTTCT GAGGAAGACG TTCAAGGCTA CAACGAATCG
CTGTTGGGGA CACCCGACTC CGGCCGCGAG TTGATCAAAG AAGTCGTTCA GGTCCTGCTC
AAGGACCGCC GCGCGGACGT GGCATTTTTG GACAAGATCA ACGCTGGCAT TTTGCAAAAG
CAATTCGCAG CGGCTACGGA CGGAAAACCT GCCCCCGTTA CGGTGTACCA CCATAGTGGC
GCTCGCAACC TCAATGGGTT CAGTTACCAG TCCGTGCCCT ACACCAAGAA ACTGGACCGG
GCGCTTTACA AGCGGGAGCG ATACGATTTT GACCGAAAGG AACGTGCCCT CTGGTTACGG
GATGTCGGCG TAACGCACGC CCAAGCGTTG CGTTCAGCAG GTATACCTCA ACGGGAAATT
GACAGGATGG TTGAAGTCGG CAAGCCCCCA GACGGGTATC AGGTCCACCA CCGCCTGCCC
CTGGACGATG GCGGGGACAA CAGTCCGGAC AACTTCATTC TGATCAAGGA CGATGTTGAG
CATCGTGCGC TGCACGGTTA TTACAACCCG GCAGAGCTGC GCATCCGTCA TCTTGCCCTT
GGTGAAACAG CTACCGTGGC CCTGGCGGTT CCGCCCAAGG ACACCATTAT TTACCCTGAT
CCGTCCAAGG GATACGTGTC AAATTCCGTT GGATTCTCAG TTTTCATGGA GATGTTTGAT
GAGCATTGA
|
|---|
| Protein sequence | MSGVSSYPRT RGTYVSPEVI RALLAQGYIS EEDVQGYNES LLGTPDSGRE LIKEVVQVLL
KDRRADVAFL DKINAGILQK QFAAATDGKP APVTVYHHSG ARNLNGFSYQ SVPYTKKLDR
ALYKRERYDF DRKERALWLR DVGVTHAQAL RSAGIPQREI DRMVEVGKPP DGYQVHHRLP
LDDGGDNSPD NFILIKDDVE HRALHGYYNP AELRIRHLAL GETATVALAV PPKDTIIYPD
PSKGYVSNSV GFSVFMEMFD EH
|
|---|
| |